Humibacter ginsenosidimutans: FPZ11_18845
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Entry
FPZ11_18845 CDS
T06119
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw00300
Lysine biosynthesis
huw00470
D-Amino acid metabolism
huw01100
Metabolic pathways
huw01110
Biosynthesis of secondary metabolites
huw01120
Microbial metabolism in diverse environments
huw01230
Biosynthesis of amino acids
Module
huw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FPZ11_18845 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FPZ11_18845 (lysA)
Enzymes [BR:
huw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FPZ11_18845 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QDZ16530
UniProt:
A0A5B8MAF8
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Position
4121932..4123413
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AA seq
493 aa
AA seq
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MPDNPLAPDWLHAPDDGNAFVPEVWPTGIRRTDDGVAVIGGVRVDDLVADYATPLYVLDE
RVVRELAERVRLAFTDAFERVDTTAEVYYAGKAFLSTEVARWVTEAGLRIDVASGGELAV
ALAAGVDAGRLGLHGNNKSRAEIDRAIEVGVGTIVIDSEQEIARVAQAASAHGRVQRVRL
RVRTGVHAHTHEFLATAHEDQKFGVALDDAERLVALIRSHDGLEFVGLHCHIGSQIFGAD
GFAESAARLVAVHARLLAGGPVPELNLGGGFGIAYTSADEPDRIEDLAQRVAQVLAAECE
RANIPLPVVAFEPGRYIVGPAGVTLYTVGTTKPVNLDADGTPAQRLYVSVDGGMSDNARP
ALYGADYSARIVSRTSPAEPVLVRVAGKHCESGDIVVNDEYLPADVAEGDVLAVAATGAY
CWSLSSNYNYLPRPAVVAVSDGASRMIVRGETVDDLLVRDLGARHAETAPAVERRHEDAP
GPLARADRQEGAK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacaacccgctggccccagactggctgcacgcccccgacgacggcaacgcgttc
gttcccgaggtctggcctacaggcatccgcagaaccgacgacggcgtcgctgtgatcggc
ggtgttcgcgtcgacgacctcgtcgccgactacgcgacgccgctctacgttctcgacgag
cgcgtggtgcgtgagctcgccgagcgcgtgcgcctggccttcaccgacgccttcgagcgc
gtggacaccacggcagaggtttattacgcgggcaaggcgttcctcagcaccgaggtcgcc
cgctgggtcaccgaggccggtctgcgcatcgacgtcgccagcggcggcgaactcgcggtg
gcgctggcggcgggagtggatgccggccggctcggcctgcacggcaacaacaagtcgcgt
gcggagatcgaccgtgcgatcgaggtcggagtcggcacgatcgtgatcgactccgagcag
gagatcgcgcgggtcgcgcaggcagcatccgcccacgggcgcgtgcagcgcgtgcggctc
cgggtgcgcaccggcgtgcacgcgcacacccacgagtttctcgcgacagcgcatgaggac
cagaagttcggcgtcgcgctcgacgacgccgaacggctcgtggcgctgatccgctcgcac
gacggtctcgaattcgtcggcctgcactgtcacatcggctcgcagatcttcggcgccgac
ggtttcgccgaatccgcggcgcggctcgtcgccgtgcatgccaggctgctggccggcggc
ccggtgcccgagctgaacctcggcgggggattcggcatcgcctacacgagcgctgatgaa
cccgaccgcatcgaagacctggcgcagcgtgttgcccaggtgctcgcggcggagtgcgag
cgggcgaatatcccgcttcccgtcgtggcgttcgagcccggccgctacatcgtcgggcct
gcaggtgtcacgctctacacggtcggcaccaccaagcccgtgaacctcgacgccgacggc
acaccggctcagcgtctgtacgtcagcgtcgacggcggcatgagcgacaacgcacgtccc
gcgctgtacggggccgattactcggcccgcatcgtctcgcgcacctcgcccgccgagcct
gtgctcgtgcgggtggcgggcaagcactgcgagtcgggtgacatcgtcgtgaacgacgag
tacctgcccgctgacgtcgccgagggcgatgtgctcgccgtggcggcgaccggcgcctac
tgctggtcgctgtcgagcaactacaactatctgccgcggcccgccgtggtcgcggtgtca
gacggagcctcacgcatgatcgtgcgcggcgagaccgtcgacgacctgctcgtccgcgac
ctcggggcgcggcacgcagagaccgcgcccgccgtggagcggcggcatgaggatgcgccg
ggtccgctggcccgcgccgatcgccaggagggggcgaagtga
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