Humibacter ginsenosidimutans: FPZ11_19050
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Entry
FPZ11_19050 CDS
T06119
Name
(GenBank) tandem-95 repeat protein
KO
K20276
large repetitive protein
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FPZ11_19050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Bact_surface_Ig-like
Motif
Other DBs
NCBI-ProteinID:
QDZ16564
UniProt:
A0A5B8M920
LinkDB
All DBs
Position
4162357..4168116
Genome browser
AA seq
1919 aa
AA seq
DB search
MAWTVIVGVVVVALTATIAIVSGGFVQQRMVLGDAAVWVTNSSKQLLGRANTAIDSLNSA
VVASATSVDVVQSGSSVLLVDHSDNTVSSVDTATVTAGKPVALPPRDAQIGIAGSRAVIV
SGTTGQIWLLPLKQLETFTSGSTPTIDLGSRVITSLSPGGTLYAYSSQAATMYRIDAEHG
DQVAQTWHVEAPGKASSRTTPLQLTSTGAGWMLYDATSRTLRSESGTHVLPAAAGDGGVV
AQPTDAETAPVVAADSGVFVLSGTAFRHTESGSYGTPAAPVWNDGCLYAAWNTGQTWRSC
TGGAAGRPGTLASLRPGSALTFRVNDGTVVLNDTAHGTTWSVQHGNALIDNWSDFAKPDD
TTTQSEENTEDTPPKYEKAEVPPVAVDDEFGARPGTTSPLPVLLNDYDANGDVLVIDSFT
PIPQEEGRIARTADDQQLQITLPADASGRIRFEYTISDGRGGEAQAQVTVTVRTPDENSP
PVQVRATKATVAAGGRVSTQVLGDWYDPDGDPIYLVSATTASPDSASSTPEGTVVFTGSG
SGTGMRNVALTVSDGRAEAHGTLAVTVRRPTEVPIIVDPFVATVTAGDQITISPLAHVRG
GVGTVRLASVPDKPDVTLQPNLDDGTFTFSSDTPGSYYVDYTVTDGQSTATGEVRVVVSA
PQDAGDAPVTVPHNAFIEQQSSGQVDVTATDYDPAGGVLLVTGVAAPKQSDGVSVQVLEQ
HILRVTLTRPLSGPVTFGYTVSNGTASTNGTVRVVEIPRPAVRQPPVADPDSATVRVGDA
IDIPVLDNDSQADGDDLTLDPVLPTPLPKGAGLLFASGNVLRYLAPDKPGNYTAVYRVDD
ADGQWATAQVSIAVREIDVASNRAPVPQTVTARVLAGNTVRIPIPLSGIDPDGDSVKLVG
QSTNPQKGAVTSVGPNWIDYQAGDYSAGTDTFDYTVVDALGAHADGVVRIGIAPQDDTAR
NPVAVEDQVAVRPGRTVSVQVLANDSDPDGGALHIVSVQRTSTQIAKATFTSKIVKVVAP
KKEGRYGFIYTIQNDAGGTSSNFLTVVVRADAPLSRPVVQDTVVSLSDILGKQQITVDPL
ANVFFADGPVSSLKLSLVDGFGDTAHVTSDGRVRVRVLAKSQIIPFKVTHPDDASISSFG
FIWVPGLDDALPQLKPGAPKLTVQSEKTLVIDLDKYVVAAGGKSVRLTDSSHVHATHADG
SSLVRNSHTLVYTSASRYFGPASISFEVTDGSSANDPRGHIATLVLPITVTARDNQPPTF
TGAQVDFEPGQQKTLDLLKLTRYPYARDQGELQYSVLDPQPQGASVSLQGSSLTVKVSDQ
TGKGTHLSVIVGVRDAVNTGKSGRIDITVVPSTRPLAVPQPDQVVARRGVTTTVNVLAND
AATNPFPSTPLRVIAVRGLANGALPQGVSVTPSADRSHLTVSVAANAVPADTTLQYEVAD
ATNDPARYTWGTVTISVEDRPEPVSNVSIAGVADHQLTVAWDAGSDNNSAIKNYVVSLVA
SGQVVGTTTCDATTCTVPTPGNGPQNAVTVQVVAVNGIGRSDPVSYPDAVWSNVVPGAPT
DVTATRGDQSIRVSWDPPKSGGGSVVTAYRVSVGTATVTVDGGTTSAKITGLTNGQQVQA
TVTSMNDFYGVSPAWNSAVSNAVTPAGAPIWISTPSVTPRNDANGTVDIGWGSAANANGS
AITSYSVSCGSQTVTTTGTSTSCTLPTGQSTTVTVTASNDVGSSTSQPVSATPPAAPQTP
TRVTVYVADPGDSQNGRFVPTFQGVSPTPSTSGGGSVSYSVKINGGDPQQLGIGDHLPVQ
SNQYGVQLSVSVQVTVTYPNGATLSSGWSDPVSAGMAVDATLGGLQYTPAANGNGGTFSW
TSAPGTASTTPAGPYNSVSITCNGTQATGNTCTTNSTNPTLAVRVGANGRTYEMDYPGQ
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtggacggtgatcgtcggggtcgtcgtcgtggcgctgacggcgaccatcgccatc
gtctccggcgggttcgtgcaacagcgcatggtgctcggcgatgccgccgtgtgggtgacg
aactcatcgaagcagctgctcggcagagccaacaccgccatcgactcgctgaactcggcc
gtcgtcgcgagcgccacgagcgtcgacgtcgtgcagtcggggtcgtccgtgctgctcgtc
gaccacagcgacaacaccgtgtcttccgtcgacaccgcgacggtgacggcgggcaagccg
gtggcgcttccgccgcgcgatgcgcagatcggcatcgcgggttcgcgagccgtcatcgtg
tcgggcacgaccggtcagatctggctcctgccgttgaagcagctcgagacgttcacctcc
ggctcgactcccaccatcgatctgggcagccgcgtcatcacctcgctgagccccggcggc
acgctgtacgcgtactccagccaggcggcgaccatgtaccgcatcgacgccgagcacggc
gaccaggtcgcccagacctggcatgtcgaggctcccggcaaggcgagttcgcgcacgaca
ccgctgcagctgacgtcgacgggcgcggggtggatgctgtacgacgcgacatcccgcacc
ctgcgttccgagtcgggcacgcacgtgctccctgccgcagcgggcgacgggggagtcgtg
gcgcagccgaccgacgccgaaacagcgcccgtggtcgccgcggattccggcgtgttcgtg
ctctccggcactgcgttccgccacacggagtccggcagctacggaacgccggccgcgccc
gtctggaacgatggatgcctctacgccgcctggaacaccggccagacctggcgctcctgc
acgggtggcgccgccggtcgcccgggaacgctcgcgtcgctgcgccccggctccgccctc
acgttccgggtcaacgacggcaccgtcgtgctcaacgacacggcgcacggcacgacctgg
tccgtgcagcacggcaacgcactgatcgacaactggtcggacttcgccaagcccgacgac
acgacgacgcagtcggaggagaacaccgaggacacgccgccgaagtacgagaaggccgag
gttccgccggtcgccgtcgacgacgagttcggtgcgcgccctggcacgacgagcccgttg
cccgtgctgctcaacgactacgacgcgaacggcgacgtgctggtcatcgattccttcacg
cccatcccgcaagaagaggggcgcatcgcccgcaccgccgacgaccagcagctgcagatc
accttgcctgccgacgcgagcgggcgcatcaggttcgaatacacgatcagcgacggccgc
ggcggcgaggcgcaggcgcaggtcacggtgacggtgcgcaccccggacgagaactcgccg
cccgtgcaggtgcgggcgacgaaggcgacggtcgccgcgggcgggcgggtctcgacgcag
gtgctcggggactggtacgacccggacggcgatccgatctacctcgtctccgcgaccacg
gcatcgcccgacagcgcgtcgtcgaccccggagggcaccgtggtgttcaccggctcgggc
tccggcacgggcatgcgcaacgtcgctctcacagtgtcagacgggagggccgaagcgcac
ggcacgctggccgtcacggtgcggcgccccaccgaggtgccgatcatcgtcgacccgttc
gtggcgaccgtgacggcgggcgaccagatcacgatctcgcccttggcgcacgtgcgcggc
ggcgtgggaacggtgcggctggcatccgttcccgacaagccggacgtcacgctgcagccc
aacctcgacgacggcacgttcacgttctcctccgacaccccgggcagctactacgtcgac
tacaccgtcaccgatggccagagcaccgcgaccggtgaggtgcgcgtggtggtgagcgcg
ccgcaggacgcgggcgacgccccggtcacggtgccgcacaacgcgttcatcgagcagcag
agctccggtcaggtcgacgtgacggccaccgactacgacccggccggcggggtgctgctg
gtcacgggcgtggccgcgccgaagcaatcggacggcgtgagcgtgcaggtgctggagcag
cacattctgcgggtgacgctgacccggccgttgagcggtcctgtcacgttcggctacacc
gtgagcaacggcacggcgagcacgaacggcaccgtgcgcgtcgtggagatcccgcggccg
gcggtgcggcagccgcccgtggctgatcccgattcggccaccgtgcgcgtcggcgacgcc
atcgacatccccgtgctcgacaacgactcgcaggccgacggcgacgacctgaccttggac
ccggtgttgccgacaccgctgccgaagggcgctggactgctgttcgcctccgggaacgtg
ttgcgctacctcgcgccggacaagccgggcaactacacggcggtgtaccgggtcgacgac
gcagacgggcagtgggcgacggcgcaggtgagcatcgcggtgcgcgagatcgacgtggca
tccaacagggctcccgtaccgcagaccgtcaccgcgcgcgtgctggcggggaacaccgtg
cgcatccccatcccgctgtcgggcatcgaccctgacggtgactcggtgaagctcgtcggc
cagtcgaccaatccgcagaagggggccgtgacgtcggtcggtccgaactggatcgactac
caggccggcgactactcggcgggaaccgacacgttcgactacaccgtcgtcgacgcgctg
ggtgcgcacgccgacggagtggtgcgcatcggcatcgcgccgcaggacgacacggcacgc
aaccccgtcgccgtcgaggaccaggtggcggtgcggccggggcgcaccgtctcggtgcag
gtgctcgcgaacgattccgaccccgacgggggagccctgcacatcgtgtcggtgcagcgc
acctcgacgcagatcgccaaggcgacgttcacgagcaagatcgtcaaggtcgtcgcgccc
aagaaggagggcagatacggcttcatctacacgattcagaacgacgcaggcggaacgagc
tccaacttcctcaccgtggtcgtgcgtgcagatgcacctttgtccaggccggtcgtacag
gacaccgtggtgtcgctcagcgacatcctcggcaagcagcagatcaccgtcgatccgctc
gcgaacgtgttcttcgccgatgggccggtgagcagcctcaagctctcgctggtcgacggg
ttcggcgacacggcgcacgtgacctccgacggccgcgtgcgcgtgcgggtgctggcgaag
tcgcagatcatcccgttcaaggtcacgcatcccgacgatgcgtcgatctcgtcgttcggg
ttcatctgggttccggggctcgacgatgcccttcctcagctcaagcccggcgcgccgaag
ctcacggtgcagagcgagaagacgctcgtcatcgacctcgacaagtacgtcgtggcggcg
ggaggcaaatccgtgcggctcacggactcgtcgcacgtgcacgccacgcatgccgacggc
tcgtcgctggtgcgcaacagccacaccctcgtctacacgagcgcctcgcggtatttcggg
ccggcatccatctcgttcgaagtgacggacggcagctcggccaacgatccgcgcggacac
atcgccacgctcgtgctgccgatcaccgtcacggcccgcgacaaccagccgccgaccttc
accggcgcccaagtcgatttcgagccgggtcagcagaagacgctcgacctgctgaagctc
accaggtatccgtacgcgcgcgatcagggcgaactgcagtacagcgtgctcgatcctcag
cctcagggtgcatccgtctcgctgcaggggagcagcctgaccgtgaaggtctccgatcag
accggcaagggcacgcatctcagcgtgatcgtcggcgtgcgggatgccgtcaacaccggc
aagtcgggacggatcgatatcacggtcgttccctcgacgaggccgctcgccgttccgcaa
cccgatcaggtggtcgccaggcgcggggtgacgaccaccgtcaacgtgctggcgaacgac
gcggccaccaaccccttcccctcgacgccgctgcgcgtgatcgcggtgcgcgggttggcg
aacggcgcgctgccgcagggcgtcagcgtgacgccgagcgccgatcgctcccatctcacg
gtgagcgtggcggcgaacgcggtgcccgccgacacgaccctgcagtacgaggtcgccgat
gcgacgaacgaccctgcccgctacacctggggaaccgtcacgatctccgtcgaagaccgg
ccggaaccggtctccaacgtgagcatcgccggcgtcgccgaccatcagctgaccgtcgcg
tgggatgccggctcggacaacaattccgcgatcaagaactacgtcgtctcgctcgtcgcc
tccggtcaggtcgtcggcacgaccacgtgcgacgccacgacgtgcaccgtgcccacccct
ggcaacgggccgcagaacgccgtgaccgtgcaggtggtggcggtgaacggcatcggaagg
tccgatcccgtcagctaccccgacgccgtgtggtcgaacgtcgttcccggcgcgccgacc
gacgtgacggcgacacgcggagaccagagcatccgggtcagctgggatccgccgaagtcc
ggtggcgggagcgtcgtcaccgcgtaccgggtgtcggtgggcacggcgacggtcaccgtc
gacggcggcacgacttccgccaagatcaccggactcaccaacgggcagcaggtgcaggcg
acggtcacctcgatgaacgacttctacggggtgtcgccggcgtggaactcggccgtgtcg
aatgccgtcacgcccgcgggggcgccgatctggatatccacgccctccgtgacaccgaga
aatgacgcgaacggaaccgtggacatcggttgggggtcggccgcgaacgccaacggatcg
gcgatcacctcgtattcggtctcgtgcggttcgcagacggtgaccacgacgggcacctcg
accagctgcaccttgccgacgggacagtccacgactgtcaccgtcaccgcctcgaacgac
gtggggagctctacgtcgcagcctgtctcggcgacgccgccggcagctccgcagactccc
acgagggtcaccgtctacgtcgccgatcccggcgattcccagaacggccgcttcgtgccg
accttccagggcgtctcaccgaccccgtcgacgagcggcggcggttcggtctcgtattcc
gtcaagatcaacggcggagatccgcagcagctgggcatcggcgaccatctgcccgtgcag
tcgaaccagtacggggtgcagctctccgtgtcggtgcaggtgacggtcacctatcccaac
ggcgcgactctgtccagcggctggtccgacccggtctcggcaggcatggcggtggatgcc
acgctcggcggcctgcaatacacccctgccgcgaacggcaacggtggcaccttcagctgg
acgtcggcccccggaacggcatcgaccacaccggccggcccgtacaactcggtctcgatc
acgtgcaacggcacgcaggcgaccggcaacacctgcaccacgaactcgacgaaccccacg
ctggccgtgcgcgtcggagcaaacggacgcacctacgagatggactacccagggcaatga
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