Hordeum vulgare subsp. vulgare (domesticated barley): 123395196
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Entry
123395196 CDS
T11213
Name
(RefSeq) dystrophia myotonica WD repeat-containing protein-like
KO
K24741
WD repeat-containing protein 20
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hvg04990
]
123395196
Domain-containing proteins not elsewhere classified [BR:
hvg04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
123395196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Cytochrom_D1
Beta-prop_DCAF12
Beta-prop_IFT140_1st
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
123395196
NCBI-ProteinID:
XP_044946075
UniProt:
A0A8I6YQ11
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Position
5H:237904583..237919352
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AA seq
566 aa
AA seq
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MAATSYSSSSSAAGAGGGAAAATAAGLKTYFKTPEGRHKLQYEKAHSATILHYNHGGKTV
SQLTVAYLKERSTGQGSTPSTPSSSSGMRSAAARLLGTGNGSRALSFVGGNGASRAVSGS
SRVGGTLGTSTSLGGSQAVANYDGKGAYIIYNSADTLFISDLNSQDKDPLKSIHFSNSNP
LCHAFDSEAKEGHDLIIGMGSGDVYSMSLRQQLQEPGRKPVAAQHYNKGDKDGASISSRC
TSIAWVPECEGIFVVSHSDGNLYVYDKSRDGNIECTFPAIKDPAQLVVSHAKSSKSNPIA
RWHVCHGSINAISFSPDGAYLATVGRDGYLRVFDFSKEQLIFGGKSYYGALLCCTWSSDG
KYLLTGGEDDLVQVWSMDDRKTVAWGEGHNSWVSGVAFDPYWSPPNSDGTGENAVYRFGS
VGQDTQLLLWDLAMDEIVVPLRHPSGGSPTFSSGSPSAHWDSACPPTGILQPSPRMRDVP
KLSPLVAHRVHADPLSGVVFSTESVVTICREGLIKIWARPAHTENNQQSNSSELVLCNTV
SKDRAITSSSKASGSSFKQPSSPGLT
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacatcgtattcttcgtcgtcatcggcggccggggctggcggcggcgccgcg
gcggcgacggcggccgggctgaagacctacttcaagacgcccgaggggaggcacaagctg
cagtacgagaaggcgcactccgccactatccttcactacaaccacggcgggaagaccgtc
tcgcagttgacggtggcatacctgaaggagaggtcgactggccaaggctccacaccatca
actccaagctccagcagtgggatgcgatcggcggcagcaaggctgctaggcaccgggaat
ggtagtcgggcacttagctttgttgggggcaatggtgccagtcgtgctgtgtctggaagc
agccgtgtgggaggaacccttggtacatctacaagccttggaggatctcaagctgtagca
aactacgatggcaagggtgcatacatcatctacaattctgcggatacactattcattagt
gacctgaattcccaggacaaggatccgctaaagtccatccattttagcaactctaaccca
ttgtgccacgcattcgactcggaggccaaggaggggcatgacttgatcattgggatggga
tcaggggatgtttattcaatgtcactgaggcaacagctacaagaacctggaaggaagcct
gttgcagcccaacattataataagggtgataaagatggagcgagcatcagcagccgttgc
acttctattgcatgggttccagagtgtgaaggcatctttgttgttagccactctgatgga
aatttgtatgtgtatgataaaagcagagatggaaacattgagtgtacatttccagctata
aaggatccagctcagttggtggtttcacatgcaaagtcgagtaagagtaacccaattgcc
aggtggcatgtttgtcatggttcaatcaatgcaatttccttttctccagatggggcatac
ttggcgacggttgggcgagatggttatttgagagtgtttgacttttcaaaggaacagcta
atatttggtggcaaaagttattatggcgctctcttgtgttgcacctggagctcggatggc
aaatatctattgacaggtggcgaagatgatcttgtgcaggtatggagcatggacgacagg
aagactgttgcatggggtgaagggcataattcttgggttagtggagttgcttttgatcca
tattggtccccaccaaattctgatggaacgggagaaaatgcggtgtatcgttttggttcc
gttggtcaggatacccaattgcttttgtgggatttggcaatggatgagattgttgttcca
ctgcgtcatccttcaggtggttcaccaacatttagcagtgggagcccttctgcacactgg
gacagtgcatgccctccaacaggtattcttcaaccttctcctagaatgcgagacgtgccg
aagctttcacctcttgtcgcccaccgagtacatgcagatcccctgtctggtgtggtgttc
agcactgaatcagtcgtcactatttgccgtgagggactaatcaaaatatgggccagacct
gcccatactgaaaataatcagcagtcgaattcttccgagttggttttatgcaatactgtc
tccaaggatagggcaatcacatcctccagtaaagcaagtggttctagcttcaagcagcct
tcatcccctggcttgacatag
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