Hordeum vulgare subsp. vulgare (domesticated barley): 123395218
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Entry
123395218 CDS
T11213
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123395218
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123395218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Stathmin
CTK3
DUF1598
DUF6744
Drf_FH3
RPW8
Erp_C
Motif
Other DBs
NCBI-GeneID:
123395218
NCBI-ProteinID:
XP_044946104
UniProt:
F2D505
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All DBs
Position
5H:complement(143856749..143859853)
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AA seq
512 aa
AA seq
DB search
MSSAFSEEILADKLAKLNNTQQCIETLSHWCIYHRKDAELIVQTWAKQFHNSGNEQKVPF
LYLANDILQNSKRNGTEFVEEFWKVLPTMLKDVAEKGDDRGKKTVSRLVDIWQERRVFGL
RAGGIKDVMLGTAPLPVLDMTKKRSHSSSIKIVKRDSRSVKLRLGVGGTAERIVTALHAV
LSEQADEDADLENCKTSMRHIGKMEKDVDSACSKAEDPRRETLCTKLKDEEATMEKWIEK
LKAVEENRAAVVSELKEALQEQESELEKVRTQLQLAEAMVEETANMQRRLNNEPIIPSSK
LASSAEPGNSLSNGQVKGQQKTAAAILADKIASSSNSQQILQSALSKFAAENSSEIRSDK
RMKVEQSSQVPSVANAAAFVPMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPP
PQHFVQQPGGLIMGMPYSMSTMNPPPPPPPPQMMNLARAQTQPQPPTQQMLQQQMQMNVA
PQMQFTLQQPGAPQFRPLQPPPGMQFFHHQSQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgcgttcagcgaggagatactggccgacaagctcgccaagctcaacaacacg
cagcagtgcatcgaaacgctatcgcattggtgcatttaccatcggaaggatgcagagcta
attgtccagacgtgggccaagcagttccataattctggaaatgaacagaaggtccctttc
ctttatctggctaatgacatcctacagaacagtaagcgcaatggtacagagtttgtagaa
gaattctggaaggtgctcccaacgatgcttaaagatgtagctgaaaagggcgacgaccgt
gggaagaagacggtctctaggctggttgatatatggcaagaaaggagagtttttggttta
cgtgccgggggcatcaaggatgtgatgcttggaactgccccccttcctgtattagatatg
accaaaaagcgctctcacagttcatccatcaagattgttaaaagagattcacgttctgta
aaactgagactaggcgttggaggaactgcagagagaattgtaactgcgttgcatgctgtt
ctcagtgaacaagcagatgaagatgctgacctggaaaactgcaagacatctatgcgtcat
attggaaagatggagaaggatgttgacagtgcctgtagcaaagctgaggatcctcgtcgt
gagactctttgcacaaaattgaaggatgaggaggctaccatggaaaaatggattgaaaag
ctcaaagcagttgaagaaaatagagcagctgttgtgtctgaattgaaagaggcattgcag
gaacaggaatctgagttggagaaggtccgcactcagttgcagttggctgaagcaatggta
gaagaaacagccaacatgcaacggaggctgaacaatgagccaatcattccatcttccaag
ctagcatcatcagcagagccaggaaattcactctctaatgggcaagtaaagggccagcag
aagacagccgctgctatccttgcggacaagatcgcatcgtcatcaaattctcagcagata
ctccaatctgcactttccaagtttgctgcggaaaattcatctgagatacgctcagataaa
aggatgaaagtcgaacaatcctcacaggtcccaagcgttgcgaatgctgctgcctttgta
ccaatgccgccaatggtcaccacagcagcacagcagccccagacaatcttggtacagcaa
actcctgtgcaaggtcaagcttctgcgccacatccccaatacaatatctatcagccccct
ccacagcactttgtccagcagcctggaggtttaattatgggcatgccatacagcatgagc
accatgaatccacccccacctccgccaccgccgcagatgatgaacctagcaagggcacaa
acacagccgcaaccacctacacagcagatgcttcagcagcaaatgcagatgaatgttgcg
ccccagatgcagttcacgcttcagcagcctggtgccccacagttcaggcctttgcagcca
cctccagggatgcaatttttccatcaccaatctcagtga
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