KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123395224
Entry
123395224         CDS       T11213                                 
Name
(RefSeq) transducin beta-like protein 2
  KO
K23325  transducin beta-like protein 2
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:hvg03012]
    123395224
Translation factors [BR:hvg03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    123395224
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Ge1_WD40 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_TEP1_C Beta-prop_EML NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_WDR75_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_Vps41 WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_Aladin Nucleoporin_N DUF7899 Tricorn_N Beta-prop_DCAF4 DRMBL
Other DBs
NCBI-GeneID: 123395224
NCBI-ProteinID: XP_044946114
UniProt: A0A8I6XWP1
LinkDB
Position
5H:584871285..584876784
AA seq 445 aa
MAAVQVAYALSVPLLSVLLGGAVALVFLAGYLRRKRADIAHVPPSAVAAAPDLPKQVRPA
AQNKKGRPQHHHASAADKEAAKKHHRLDLNTLRGHTDCVTALDFSSDACNLATVCADGVV
RVFRIDDASSKSFKILKINLPAGAHPTAIAYSEGSSSVVVAAQALLGSSLYMYADVGAPP
TGGNKQQGKLSPPEIKWDHKKIHGKESVLNLAAARATHGTGDGSTIVISCSEATDIKIWH
GKSGKELGTVDTNQLKNNMADISPNGRFIAAAAFTADVKVWEIVYSKDSSVKEVNRVMQL
KGHKSAVTSLCFTPDSEKIITASKDGTIRVWNINVRYHLDEDPKTLRVLPVPLHDSKGST
CLYEHMGISPDGIVLAVTSGSTLQWLCAETGVVLDTAEKAHEGAISGIAWAPRTIPNGGA
PAFVLASCGDDKKVKLWLAPEVSST
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggcggcggtgcaggtcgcgtacgcgctctccgtgccgctcctctcggtgctgctcggc
ggggcagtcgcgctcgtcttcctcgccggctacctgcgccgcaagcgcgccgacatcgcg
cacgtgcccccctccgccgtcgccgccgccccggacctgcccaagcaggtccgccccgcc
gcccagaacaagaagggacggccccagcaccaccacgcctccgccgccgacaaggaggcg
gccaagaagcaccaccgcctcgacctcaacaccctcaggggacacaccgactgcgtcact
gcgcttgacttctccagcgacgcctgcaacctagccaccgtatgcgcggatggggttgtg
agagtattcaggatcgatgatgcgtcaagcaagagctttaagattctgaagataaacttg
cctgctggggcacatcccactgccatcgcttactcagaagggtcatcatccgttgttgtg
gcagcacaggcgctgttaggctcgtcgctctacatgtatgcggatgttggtgctcctcca
actgggggaaacaaacagcagggcaagctttctcctcctgagatcaagtgggatcacaaa
aagattcatggcaaggaatcagtgctgaaccttgcggcagctcgtgcgactcatgggact
ggtgatgggagcacaatagtgatttcttgctctgaagcaactgatatcaaaatatggcat
ggaaagagtggcaaagagttgggaacagttgacactaatcagttaaaaaacaatatggct
gacatatccccaaatggccgcttcattgctgctgcagctttcacagctgatgttaaggtg
tgggagattgtttattcgaaggatagttcagtgaaggaggttaacagggttatgcaactc
aagggtcacaagagtgctgttactagtttgtgtttcactccggattctgagaagattatt
actgcatcaaaagatggtaccattcgagtatggaatatcaatgtaaggtatcaccttgac
gaggatcccaaaaccttgagagtattgccagtccctctgcatgattcgaaaggctctact
tgcctgtatgaacacatgggcatctccccagatggtatagttctggctgtgacaagtgga
tcgacgttgcaatggctatgtgcagaaactggtgtggttttggatacagccgagaaggct
catgaaggtgctatttctggcattgcttgggctccacggactattccaaatggtggtgct
cctgcttttgtgttagcaagttgtggggacgacaaaaaggtgaaactgtggttagctcct
gaggtcagttcgacataa

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