Hordeum vulgare subsp. vulgare (domesticated barley): 123395325
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Entry
123395325 CDS
T11213
Name
(RefSeq) vacuolar protein sorting-associated protein 25-like
KO
K12189
ESCRT-II complex subunit VPS25
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123395325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123395325
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123395325
Membrane trafficking [BR:
hvg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
123395325
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123395325
Exosomal proteins of colorectal cancer cells
123395325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ESCRT-II
Cauli_VI
WHD_CHMP7_1st
Tox-REase-5
MMM1
Motif
Other DBs
NCBI-GeneID:
123395325
NCBI-ProteinID:
XP_044946245
UniProt:
A0A8I6XQ70
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Position
5H:249333322..249338049
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AA seq
214 aa
AA seq
DB search
MQRPVDFKLPHFFNYPPYFTLQPVRETREKQVQLWKELILDYCRSQKMYIISLEEDFPLF
SNPKIERSLSYEAKEAFLAALVSEGRAEWVDKSHKKCLILWLRIQDWANYIVDFVKENGL
EVTTIEDIRSGIETHGTEMSSYVVYKDEVSGVYDDWEECQRQVHHFSGNNYKGYTTRAEA
KARYARYLAGERRERRRNHMKISFIAMMLYVMVV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggccggtggatttcaagctcccccactttttcaactacccgccctactttact
ttgcagcctgtgagagaaacacgtgaaaagcaagtgcagctatggaaagagctgatactt
gattactgtagaagtcaaaagatgtatataatctccctggaagaagattttccgttgttc
tccaatccaaagattgagagatctctaagctatgaagcaaaggaggcgttccttgcagct
cttgttagtgaaggtcgcgcagagtgggttgacaaaagtcacaagaagtgtctcattctt
tggctgcggattcaagattgggctaactacatagtagactttgtaaaggaaaatgggttg
gaagtgacaacaattgaggatatacgctctggaattgaaacgcatgggactgagatgtcg
tcgtatgttgtgtacaaggacgaggtttccggagtgtacgacgactgggaggagtgtcag
agacaggttcatcatttcagcggtaacaattacaaaggatacaccactagggcggaggct
aaagctagatacgcgcgctatctagcgggagagaggagggagcggaggaggaatcatatg
aagatcagtttcatcgcgatgatgctctatgtgatggtagtttag
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