Hordeum vulgare subsp. vulgare (domesticated barley): 123395581
Help
Entry
123395581 CDS
T11213
Name
(RefSeq) neutral ceramidase-like
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00600
Sphingolipid metabolism
hvg01100
Metabolic pathways
Module
hvg_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
123395581
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
123395581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
GEVED
Motif
Other DBs
NCBI-GeneID:
123395581
NCBI-ProteinID:
XP_044946534
UniProt:
A0A287Q7L6
LinkDB
All DBs
Position
5H:complement(4879924..4890016)
Genome browser
AA seq
783 aa
AA seq
DB search
MEASSCLRYQFCGFGLSWIWLCLLLLRLFQNCSPVLSESPYLVGLGSYDITGPAADVNMM
GYANAEQVTAGIHFRLKSRAFIVAEPDDGKRVVFVNLDACMASQLVTIKVLERLKVRYGD
LYSENNVAISGIHTHAGPGGYLQYVVYIITSLGFVRQSFDVIVDGIEQSIVEAHNNLRPG
KIYVNKGDLLDAGVNRSPSGYLNNPAEERSKYRYNVDKEMTLVKFVDDEFGPVGSFNWFA
THGTSMSRTNSLISGDNKGAAARFMEDWAEQNGLPKQTGHANSDDFGSLHLPRRVSTIIP
EPDEITDDLMQLASSYEASGGRILAGSNITRRIRSTQEKNAKFVSAFCQSNCGDVSPNVL
GAFCIDTNLPCDFNHSTCNGKNELCYGRGPGYPNEFESTRIIGNRQFLKAVDLFNSASEE
LQGKIDYRHTYLDFSQLEVSVSTSTGGQQVVKTCPAAMGFSFAAGTTDGPGAFDFKQGDD
KGNPFWRLVGGILKKPGKEQVECQAPKPILLDTGEMKEPYDWAPAILPIQIIRIGQLVIL
SVPGEFTTMAGRRLRDAIKNVLISGSNGEFNSNTHVVLAGLTNTYSQYVTTFEEYQVQRY
EGASTLYGPHTLSAYIQAFQKLATAMIENKEIPATNILPPDMLDKQIGLLPGVVLDSTPP
GVHFGDVSSDVEANSDFRKGSTVNATFHSACPRNDLLTDGTFALVERLNGNDWIPVYDDD
DWSLQFKWSRPSKLSPESFATLEWTIPEDAAPGVYRLRHFGASKALLGSIEHFTGTSRAF
AVR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggaggcatcgtcttgcttgcgctaccaattctgcggttttggtttgtcctggatatgg
ctatgtcttcttttactgcgtctctttcagaattgcagcccggtgctctcagaatctcct
tatctcgtcggcttggggagctatgacataacagggcctgcggcagatgttaacatgatg
ggatatgcaaatgctgagcaggttacagcagggattcacttcaggctaaagtcacgagcg
tttattgtcgccgagcctgatgatggaaagcgtgttgtctttgtgaatctcgatgcttgc
atggcatcacagcttgtgactataaaggtgctcgaaaggctaaaagtgaggtacggtgat
ctttatagtgagaataatgtggctatcagtggcatccatacccatgctgggcctggaggt
tatctgcagtatgtagtctatattatcacatcacttgggtttgttcgccagtcattcgat
gtaattgtcgatggcattgagcaaagtattgttgaagctcataacaatctccgtcctggg
aaaatctatgtgaataaaggtgaccttttggatgctggtgtgaatcgcagcccgagtggg
tatctgaataatccagctgaagagagaagcaaatatcgatacaatgttgataaagaaatg
acccttgttaagtttgtggatgatgaattcggtccagttggaagttttaattggtttgcg
actcacggaacatcaatgagtcgtacaaattctttgataagtggtgataacaaaggagca
gctgcacgtttcatggaagactgggctgaacaaaatggccttccgaagcagacaggtcat
gcaaattctgatgattttggatctttgcaccttccgagaagagtctctacaataatacca
gagccagatgagataacggatgacttaatgcaattagcatcatcctacgaggcctcaggt
ggcagaatattggcaggttcaaatatcactaggcgcattagaagcactcaagaaaagaat
gccaaatttgtttccgcattttgccagtcaaactgtggagatgttagtccaaatgtcctg
ggagcattttgcatagacaccaaccttccttgtgacttcaatcacagcacgtgtaatggg
aagaacgaactttgctatggacgaggcccagggtatcctaatgagttcgaaagtacccgc
ataattgggaataggcaatttctgaaggctgtagatctctttaattctgcttcggaagaa
ctacaaggaaaaattgactatcgtcacacttacttagatttctcacaactcgaagttagt
gtttctacgagtacgggaggtcagcaggtggtgaaaacatgcccagcagccatgggattt
tcatttgctgctggaaccacagatggccctggagcttttgatttcaaacaaggagatgac
aagggaaaccccttctggagattagtggggggcatactaaagaaaccagggaaagagcaa
gtcgagtgccaagctccaaaaccaatattgctagacactggtgaaatgaaggaaccatat
gattgggcgcctgcgatactccccattcagatcataagaatcggtcagctggttatcttg
tctgttcctggagaattcacgacaatggctggcaggcggttacgcgatgctataaaaaat
gtactgataagtggcagcaatggtgaatttaattccaacactcacgttgttcttgcgggg
ctgacaaacacatattctcagtatgttacaacattcgaagaataccaggtccaaagatac
gagggtgcgtcaactttgtacggcccccataccttgagtgcatacattcaagcttttcag
aaacttgccacagctatgattgaaaacaaagagatcccagcaacaaacatcctacctcct
gacatgttggacaagcaaatcggactgctgccaggcgtcgttctcgactcgactcctcct
ggtgttcactttggggatgtcagctccgacgtcgaagcaaactcagacttcaggaagggc
agtaccgtgaatgctacattccattcggcctgtccacggaatgaccttctaactgacggt
accttcgcccttgttgagagactaaatggtaacgactggatccctgtctacgacgatgac
gattggtctttgcaattcaagtggtcgaggccttcgaaactcagtccggagagctttgcg
acgctggagtggaccattcctgaagatgctgcccctggtgtttataggctgaggcatttt
ggtgcctccaaggcgctgttagggtcgatcgagcattttacaggtacctctcgcgcgttt
gcagtgcgttaa
DBGET
integrated database retrieval system
