Hordeum vulgare subsp. vulgare (domesticated barley): 123395624
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Entry
123395624 CDS
T11213
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03030
DNA replication
hvg03410
Base excision repair
hvg03420
Nucleotide excision repair
hvg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123395624
03410 Base excision repair
123395624
03420 Nucleotide excision repair
123395624
03430 Mismatch repair
123395624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvg03032
]
123395624
03036 Chromosome and associated proteins [BR:
hvg03036
]
123395624
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123395624
DNA replication proteins [BR:
hvg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123395624
DNA Replication Termination Factors
ELG1-RFC complex
123395624
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123395624
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123395624
Check point factors
HRAD17(Rad24)-RFC complex
123395624
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_5
AAA_14
AAA_assoc_2
nSTAND_NTPase5
AAA_11
AAA_16
ResIII
SLFN-g3_helicase
AAA_24
AAA_2
nSTAND3
PhoH
AAA_19
AAA_30
AAA_28
AAA_25
AAA_23
DNAX_ATPase_lid
AAA_7
Cdc6_lid
RNA_helicase
NB-ARC
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
123395624
NCBI-ProteinID:
XP_044946588
UniProt:
A0A8I7BE24
LinkDB
All DBs
Position
5H:241636353..241640203
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPPSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLETADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKARVLELNASDERGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMSN
RILHICSEEGLTLDAHALSTLSTISQGDLRRAITYLQSAARLFGSSISSSDLISVSGAIP
EDTVKSLLVACKSGEFDVANKEVSNIIADGYPVSQLLSQFLDVIVNADDIPDEHKARICR
KLGEADKCLVDGADEYLQLLDMASETIRALFNIPQGLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgtgccgccgtcacaaccatgggtggagaaataccggccgaggcaggtg
aaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaacaccctcgagaccgcc
gacttgccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgctc
gccattgcctaccagctctacggcccagagctctacaaggcaagagttttggaacttaat
gccagtgatgaacggggaattaatgtggtgaggacaaagatcaaggattttgctgctgtg
gctgttggttctgcacggaaaggtggttatccctgcccaccatacaagattattatacta
gacgaagcagattcgatgacagaagatgcccagaatgcattgaggcgtactatggagact
tactctaaagtgacaagattctttttcatatgcaattatatcagcaggataatagagcca
cttgcatcaagatgtgcaaagtttaggttcaagcctctttcagaagatgtgatgagcaat
cgcattttgcatatatgcagtgaagaagggctcactctggatgctcatgcgctatccaca
ttaagtaccatctctcaaggagatcttcgtcgtgctataacttatcttcagagtgcagct
cgcttatttggatcttctatttcttccagcgacctgattagtgtttcaggggctatccct
gaagatactgtcaagtcattgcttgtagcatgcaaatctggtgaatttgatgtggcaaac
aaggaagttagcaatattattgcagacggatatccagtttcccagctgctctcgcagttt
ctagatgtgatcgttaatgcggatgatattccagatgagcacaaggcaagaatatgtaga
aagcttggggaagctgataagtgcttggtcgatggggcagatgagtatttacagctctta
gatatggctagtgagacaatccgtgcgctgtttaacatcccgcaagggctggtcttctaa
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integrated database retrieval system
