Hordeum vulgare subsp. vulgare (domesticated barley): 123395670
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Entry
123395670 CDS
T11213
Name
(RefSeq) regulatory-associated protein of TOR 1 isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
123395670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123395670
Membrane trafficking [BR:
hvg04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
123395670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
HEAT
WD40_MABP1-WDR62_2nd
HEAT_EZ
Beta-prop_CAF1B_HIR1
HEAT_2
DUF4042
EIF3I
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
123395670
NCBI-ProteinID:
XP_044946627
LinkDB
All DBs
Position
5H:326493649..326505194
Genome browser
AA seq
1390 aa
AA seq
DB search
MALGDLMASRLVHSSSSSSSSSLPTPSLAAVNHQTERVDGELPVANGPELRREDAGEEDE
EGTAVALVPCLPQVVVLCEQRHEGFDEATAAAAGPSTSGLVSKWRPKDRMKTGCVALVLC
LNISVDPPDVIKISPCARMECWIDPFSMAPPKALETIGKTLHSQYERWQPKARYKLQLDP
TVEEVKKLCNTCRKYARSERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPITDLDSW
LKTPSIYVFDCSAAGMIVKAFLERLDWSSSSSASSVKDCILLAACEAHQTLPQSAEYPAD
VFTACLTTPIKMALHWFCNRSLLSGSLEHSLIDQIPGRQNDRKTLLGELNWIFTAITDTI
AWNVLPHELFQRLFRQDLLVASLFRNFLLAERIMRSANCSPITYPLLPPTHQHHMWDAWD
MAAEICLSKLPHLIADPNAEFQPSPFFTEQLTAFEVWLDHGSEDKKPPEQLPIVLQVLLS
QSHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTSAMELRQILVFIWTKILSLD
KSCQVDLVKDGGHAYFIRFLDSLDAYPEQRAMAAFVLAVIVDGHRRGQEACMSAGLIDVC
LRHLQPENPHDVQTEPLLLQWLCLCLGKLWEDFPEAQLLGLQSNAPEIVTCLLSEPQPEV
RASAVFALGNLLDIGSQSVNGGDDDSDDDEKVRAEINVVRSLLQVTSDGSPLVRAEVSVA
LTRFALGHNKHLKSVAAEYWRPQTNSLLKSLPSLANINNPSNVYSPSNFLQGSSGLSSHI
GPVLRVGSDTSATGRDGRISTSSPIATNSIMHGSPQSDDSSQHSDSGILLRENASNGGLS
YTRSRPIIDSGIYSLFISTMCSIAKDPYPRIANIGRRALSLVGVEQVVMRNTRFGSGGAG
ETSAPSSNIGMARSSSWFDMNSGISMAFRTPPVSPPQHDYLTGLRRVCSMEFRPHLLNSP
DGLADPLLSSAAAPSTSELNILPQSTIYNWSCGHFSRPLLNGSDDNGEVGARREQRERTA
LDCIAKCQRSSACKMTSQIASWDTKFELGTKSALLLPFSPIVVAADENEQIRVWNYDDAL
PVNTFENHKLSDRGLSKLLLINELDESLLLVGSSTPRLFMAVSCICKYVLLVIYIFPTVG
DGNVRIWRNYTQKGGQKLVTAFSSVQGHRAAGRSVVIDWQQQSGYLYASGDMSSILVWDL
DKEQLLNTIPSSADSGISALSASQVRSGQFAAGFIDGSVRIFDVRTPDRLVYMARPHAPR
TEKVVGIGFQPGFDPYKIVSASQAGDIQFLDVRRAAEPYLTIEAHRGSLTALAVHRHAPV
IASGSAKQMIKVFSLEGEQLTIIRYQPSFMGQRIGSVNCLSFHPYKSLLAAGAGDNALVS
IYAEDNYQVR
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagatctcatggcgtccaggctcgtgcactcgtcctcgtcctcgtcctcg
tcctcgctgcctactccctccttggcggcggtgaaccaccagacggaacgcgtggatggt
gagctccctgtcgcgaacgggccggagcttcggagggaggacgccggcgaggaggatgag
gaggggacggccgtggcgcttgtgccgtgcctgccgcaggttgttgtgctctgcgagcag
cggcacgaggggttcgacgaggccaccgctgccgcggccgggccatctaccagcgggctc
gtctccaagtggcgccccaaggacaggatgaagaccggatgtgttgcacttgtattatgt
ttaaacattagtgttgatccgccggatgtaattaaaatttccccttgtgcaagaatggag
tgttggatagatccattttctatggcacctcccaaagcccttgaaactattggaaaaaca
ttacactcacagtatgagcgatggcagcctaaggctcgttacaagcttcagctggatcca
acagtcgaagaagtcaagaagctttgtaatacttgccgcaaatatgccagatcagagaga
gttctttttcattacaatggtcatggtgtaccaaagcctacagctaatggagagatttgg
gtgtttaacaagagttatacacagtatatccctcttcctattactgatctcgattcatgg
ctgaaaacaccatcgatttatgtttttgactgctcagcagctggaatgattgtgaaagct
tttctagagcgcctagactggagttcaagctcttctgcgtcttcagtgaaggattgcatt
ctccttgctgcctgtgaggcacatcaaactcttcctcagagtgcagaatatcccgctgat
gtgtttacagcttgcctgactactcccataaagatggcattgcactggttttgtaatcga
tcattactcagtgggtctctggaacactctcttattgaccaaattcctggaaggcaaaat
gaccgtaaaacacttctgggggagttaaactggattttcactgctattacagatactatc
gcatggaatgttcttcctcatgaattattccaaaggcttttcaggcaggatcttttggtc
gccagtctcttccgcaacttcttacttgctgagagaatcatgcgatctgcaaactgttct
ccaattacgtacccactattgccacccacacatcaacaccatatgtgggatgcatgggac
atggctgcggagatctgcctttccaagcttcctcatttgattgctgatccgaacgcagag
tttcagccgagcccatttttcacggaacaattgacagcatttgaagtgtggcttgatcat
ggctctgaggataagaagccccctgaacagttacctattgttcttcaggtcctgcttagc
caatcacacagatttagagcacttgttctgcttggaagatttcttgatatggggccatgg
gcagttgatttggccttgtctgttggtattttcccttacgtgctcaaactgctccaaacc
agtgcaatggagttgcgtcaaattcttgtgttcatatggacaaaaattctctctcttgat
aagtcatgccaggttgatttggtgaaagatggagggcacgcatattttatcaggtttctt
gatagtttggatgcttacccggagcagcgtgcaatggctgctttcgttttagcagttatt
gtggatgggcataggaggggtcaagaggcttgcatgagtgcaggtctcatagatgtttgc
ctgagacatctgcaacctgagaatcctcatgatgtgcagacagagcctttgcttttgcaa
tggctttgtttatgccttggcaaactgtgggaagatttccccgaggctcagttacttggt
ctacaatcaaatgcacctgaaattgttacatgtttattgtctgagcctcaacctgaggtc
agagcgtctgctgtttttgcacttggaaatctgttggacattggatctcaatcagtgaat
ggaggtgatgacgactctgatgatgatgaaaaggtgagagctgaaataaatgttgttcga
agccttctgcaagtcacttcagatggtagccctcttgttagagctgaggtttctgtagct
cttactcgctttgcgctgggccacaacaaacatctcaaatctgttgctgcggagtactgg
agacctcaaaccaattcactgctgaagtcactaccatcattggctaatattaataaccca
agcaatgtttacagtcccagtaactttttgcaaggaagcagtggcctttcttctcatatt
ggtcctgtgttaagggttggtagtgataccagtgccacaggacgagatggaagaatttct
acgagcagcccgattgcgacaaatagcatcatgcatgggtctccccagtcagatgattct
tctcagcactctgattcaggcatattgctgagagagaatgcaagtaatggtggtctcagc
tacaccaggtcaaggcctattattgacagtggaatttattccctatttatttcgacgatg
tgctccattgctaaagatccttaccctagaattgcaaatattggccggagagcactgtcc
cttgtaggggtcgagcaagtggtcatgagaaatactagatttggcagtgggggtgcagga
gaaacatctgctccttcatcaaacataggaatggcacgttcttcttcctggttcgacatg
aattctggaatctcaatggcatttaggactcctcctgttagtccacctcagcatgattac
cttacagggttgcgccgcgtgtgttcgatggagttcagaccacatctcttgaattcacct
gatggcttagctgatccactcttaagctctgctgctgcccccagtaccagtgagcttaat
atacttccccaatcaacaatttacaactggagttgtggccacttctctaggccacttcta
aacggttctgatgataatggggaagtaggtgctagaagagaacagagagaacgaactgca
ctggattgcatcgcgaagtgccagcgttcctcagcatgcaagatgactagccaaattgct
agctgggatacaaagtttgagttgggtacaaaatcagcattgttgttacctttttctcca
atcgtcgttgcagctgatgaaaacgagcaaataagagtgtggaattacgacgatgctcta
ccagtgaatacttttgaaaaccacaagttatctgacagaggactatccaaacttttactt
atcaatgagcttgatgaaagcttgcttttagttggctcaagtacgcctcgcctctttatg
gctgtctcttgtatctgtaaatatgtactccttgttatatatatttttcctactgtaggt
gatggaaatgtccgtatatggagaaactatactcaaaagggaggacagaaacttgtaact
gctttctcatcagttcagggccatcgagctgcaggccgcagcgttgtgattgactggcaa
cagcaatctggttatctgtatgcatctggtgacatgtcatccatcctcgtatgggatctt
gacaaggagcaacttctcaacaccattccatcatctgctgatagtggcatttcagctctg
tctgcatctcaggttagatctggtcaattcgctgccggttttattgacggatccgtaagg
atatttgatgttcgtacccctgacaggctagtttatatggcaagaccacatgccccaaga
actgaaaaggtcgtcggtataggatttcagcctggatttgatccatacaagattgtaagc
gcatctcaagctggagacattcagtttcttgatgttagaagggctgctgaaccctacctc
actattgaagctcacaggggttcattaacagcattggctgttcaccggcatgccccagtc
attgcaagtggctcagctaagcagatgattaaagtgttcagtcttgaaggagaacagcta
acgatcattcgctaccagccatcttttatgggccaaaggataggaagtgtaaactgcctt
tcgttccatccgtacaaatctctcctggctgccggagctggtgataatgctctggtctct
atctatgccgaggacaattatcaagtaagatga
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integrated database retrieval system
