Hordeum vulgare subsp. vulgare (domesticated barley): 123396026
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Entry
123396026 CDS
T11213
Name
(RefSeq) flowering locus K homology domain
KO
K21444
poly(rC)-binding protein 3/4
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123396026
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
123396026
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GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
CEND1
RemA-like
Motif
Other DBs
NCBI-GeneID:
123396026
NCBI-ProteinID:
XP_044946991
UniProt:
A0A8I6Y5M4
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Position
5H:complement(49266713..49273136)
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AA seq
520 aa
AA seq
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MDGPAETPAVVEHEMNDIPDPTSGEQADASIEGQANPEEEAEKPSADEEPKGTNNEESEN
PSDEAQVTVKDEDMGDQNREDQAIGSLEEPANVDGGEAEADQLANVVAEDTKWPGWPGES
VFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDALVP
PAIDGLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGKQGTTIKSIQDA
SKCALRILENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDRSVLPLFEMQMK
VHSAPREQPMPAPQQWGPPPPWSHPPNIPPSGPGYGGNPHFMPPRPQDSYYPPPNVHHVE
KQPHYGISSYGRDANPTAAPTSGNQHLSHGSSQLSQKMQVPLSYADAVIGSAGANISYIR
KHSGATISIQEGVPGEMTVEIAGSASQVQTAQQLIKNFMAEASPQVPPPGPAPPSQPVDS
GYNSYAPYGGPSYATPPGGAGPTPHNGGGYGAHYPPNYGY
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatgggcctgctgagactcctgctgtcgtggagcatgagatgaacgacatccctgat
cctaccagcggcgagcaagccgatgctagcattgagggacaagccaatcctgaggaagaa
gcagaaaagccatctgctgacgaggaacccaaaggcacaaacaacgaagaatctgagaac
cccagcgatgaagcgcaggtgactgtgaaagatgaggatatgggggatcagaacagagag
gaccaggctattggttcacttgaagagccagcaaacgttgatggtggggaagctgaggca
gaccaactggccaatgtggtggcggaagacacgaaatggcctgggtggcctggagaaagt
gtgttccgtgtactggtttctacccaaaaggtgggtgctctcattggccgcaaaggggag
tttatcaaaagaatgtgtgatgaatccaaagcccgcataaagattcttgatggcccacca
ggtgttccagaaagagctgtaatgatttcagcaaaggacgagccagatgcactggttcct
ccagccattgatggtttgctcagagtacataatagaataacagatggtttggacagtgaa
accgaccaggctcagaaaggtgctagtcctgcagggccaacacggctacttgtgccagct
tcccaagctggaagcctaattggcaagcaaggaacaaccattaaatcaatacaggatgcc
tcaaagtgtgctctccgcattcttgagaatgtgccacctgtggcattaaatgatgacaga
gttgttgagatacagggtgaacctcatgatgttcacaaagcagtggaactgattgcaaac
catttgagaaagtttcttgttgaccgtagtgttctccctttattcgaaatgcagatgaaa
gtgcacagtgcgcccagagagcaacctatgcctgctcctcagcagtggggtcctcctcca
ccctggagtcatccaccaaacattcctcccagtggcccaggttatggcgggaacccacat
tttatgccgccaaggccacaagacagctattatcctcctcctaatgtgcaccatgtggaa
aaacaaccgcactatgggatttcttcatatggacgtgatgcaaatccaactgctgctcct
acctcagggaatcaacacctatcgcatgggtcttctcaactttcgcaaaagatgcaagtt
cctctttcctatgctgatgctgtgattgggtctgctggtgccaatattagctacatccgc
aagcatagtggtgcaacaataagtattcaagaaggtgttcctggggagatgacggtcgag
attgcaggaagtgcctcacaagttcaaactgctcagcagctgatcaagaatttcatggcc
gaagcctctccccaagttcctccaccaggtcccgctcctccctcccaaccagttgactcg
ggctacaactcatacgcgccgtatggaggaccctcgtatgcaactccaccagggggcgca
ggtcctacccctcacaatggaggaggctatggggcacattacccaccgaactacgggtac
tag
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