Hordeum vulgare subsp. vulgare (domesticated barley): 123396087
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Entry
123396087 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123396087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123396087
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123396087
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
HECT type E3
123396087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
Arm
Motif
Other DBs
NCBI-GeneID:
123396087
NCBI-ProteinID:
XP_044947062
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Position
1H:31861414..31867171
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AA seq
1361 aa
AA seq
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MAAEVLRYVQAALADEAGCADAHAAALATLCDALAFTHPDVLLAAVDVAYFAARLPAFLA
AGQNDLPVFAARAIAEAVDILPQWAAVFLQHGAVEALRDRLLAADNIELAEEVQNNRKFI
WWWYYYYLLTPSGFLCPGRQCLRALDEISQECPDECLRLGVAAAALHLFDFLSASKQKMA
LKIVTQLVQECDDADVPKAMEAAPALCNLLQSSDNSILGSALSCLGMLAADAHGKAEHMD
RLCESKVVDTAMGLLDKDGWKILDDDTLPGILALLKHIASVSEKAVNSLFDLGVCDLLKQ
MITCYSCSPSGSDKLEMLVELLYQLMQPLGTSGQMNDTTEQNAHVDQLASIVTLITQVAK
CGALSSVCYRCVVVIGNIVELSTPTFLVGLQKTANLSSFLTCMLARKNRHIVFQTLEVSK
TLLKKHHQFFFESFTKEGVKHAIGTIQAQEKNRNSSERLKRKNNTQEWCMCFDLDLDSSS
TDGCKIENNAILNLAEEIKKSFVVVKANKKSPHRFGCVIKFVRDFFARLNRHALTVLTQD
PDLCKELSDISRKFLSDELPSTSTFAFAKSGSAKYLVDYLSNRAYLKSNLNNCEDLTEQL
KEVQHRLQKFTHLALKVSNGSSVKPLGILVDKLLDALHMSYESFPVILSDHGQRTRESTM
IPLRHSRTQESESLDIKFVKARREKVLRSYGGVLPVSLSSKPGEMEAILWPVICSKGNAQ
GSSRLMFSYKGTKLQPSATIFESLVRLMNAGQSDIVIDSSFWDEEYRISYNRNKSENIPS
TSSCNTRLFAVQEKLEQSIVKDPFFCSLFLGKLPGDVDESDPSYDLLFTLKVLEGLNRFS
YQLSMDQQICKFAEGYLQNLDDLKVTISPIPQHQFMSNLLTNKLELQMQERLFEDGLVPS
WCVYLAETCPFLLSFSARWKYFCLTVHRSFMGDETSIPDGSSTPDEESAAPDEEEEESDA
QNEASKKTRKHKVTRDNILESAASMMTKHGSSTKTIEVVFVGEVGTGRGPTFEFYSTVSH
ELQRLGIGMWRGDNNARKAGEAGFVRSSFGLFPQPWSSVGTSTRGIELSDVVKKFKLLGH
VVARALLDGRILDIPLSKAFYKIMLGQELDIYDIPSFDPELGKTVLEFQALVKRKKFLEK
SSEKTPNRNADLSYKNVRLEDLCLDFTLPGNPDYELVPGGSEKIVTLENLEEYVNLIVDA
TLKSGIVKQVEAFKSAVNEVFALKTLRMFDEEEMERILCGEQDSWASSKLEDHIEFEHGY
DASSPPIKSFLEILREFEREDQRAFLQFTTGAPQLPLGGLASLDPKLTVVRKQCDGNIDN
ELPSVNTCRHFIKLPPYSSKEIMLMKLKYALAEGLGSFHLS
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggtcctgcggtacgtgcaggcggcgctggcggacgaggccgggtgcgcg
gacgcgcacgcggcggcgctggcgacgctctgcgacgcgctggccttcacccacccggac
gtgctcctcgccgccgtcgacgtcgcctacttcgcggcccgcctccccgccttcctcgcc
gccggccagaacgacctgcccgtcttcgccgcgcgggccatcgccgaggccgtcgacatc
ctgccgcagtgggccgccgtcttcctccagcacggcgccgtcgaggccctccgcgaccgc
ctcctcgccgccgacaacatcgagctcgccgaggaggtacaaaataatcggaaatttatc
tggtggtggtattattactacttactcactccgtctggcttcttgtgtcccggccggcag
tgcctccgagctctggacgagatatcccaggaatgcccggacgagtgcctccgcctcggc
gtcgccgccgccgcgctgcacttgttcgacttcctctccgccagcaagcagaaaatggcg
ctcaagatcgtcacccagctcgtccaggagtgcgacgacgcggacgtgcccaaggccatg
gaggccgcgccggcgctctgcaacctccttcagtcctccgacaactcgatactggggtct
gcgctctcttgcctggggatgctcgccgccgatgcacacggcaaggccgagcacatggac
aggctctgcgagtccaaggtggtcgacacggccatgggactgctggacaaggacgggtgg
aagatcctcgacgacgacactttaccgggcatccttgcgctgctcaagcatattgcttcc
gtttctgagaaggctgtgaattcccttttcgacctgggcgtttgcgatttgctcaagcag
atgattacttgctacagctgctcgcccagtggcagcgataagttggagatgcttgtggag
ctcctctatcagcttatgcagcctcttggaacatctggacagatgaatgacaccacggag
caaaacgcgcatgttgaccagcttgctagcattgtgacccttataacacaggttgcaaaa
tgtggtgcgctatcatcggtttgctacaggtgcgttgttgtcatcggcaacattgttgaa
ttaagcacacctactttcctggtgggattacagaagactgcaaatctctcgagctttctt
acctgtatgttggcccggaagaaccgccatatcgtgttccaaacgctcgaagtttcaaag
accctcctgaaaaaacaccatcagtttttcttcgagagctttaccaaggagggtgtaaag
catgcaattgggaccatacaagcacaagaaaaaaatagaaactccagtgagaggttgaaa
aggaaaaacaatacgcaagaatggtgtatgtgctttgatttggacttggattcttcctcg
acagacgggtgcaagattgagaacaatgctatcttgaatcttgcagaagagataaagaaa
agctttgttgtcgtgaaagcaaataagaaatctccacataggtttgggtgtgttattaaa
ttcgtcagagatttctttgctaggctgaatcgtcatgccttgacggttctcacccaggat
ccggatctctgcaaagagttgtctgatatttcaaggaaatttctatcagatgaacttcca
agtacctctacttttgcgtttgcaaagagcggatccgccaagtatttagtagattatctc
tccaacagggcatacttgaagtcaaacctcaataattgcgaggacttaacagagcagctt
aaggaagtgcaacatcgattgcagaagttcacccatttggcacttaaggtgtccaatggt
agctccgtgaagccccttgggattttggtggataagctgctagacgctctgcacatgtct
tatgaaagttttcctgtaatactatctgatcatggacagcgtacccgtgagagcacgatg
attcctctgaggcattcaagaacccaggaatcagaatcactggatataaaatttgtaaag
gcgcgcagggagaaagtgttgcgcagttatggtggtgttctcccggttagtctttcttca
aagccaggtgaaatggaagcaatcctctggcctgtgatttgttccaaggggaatgcgcag
ggatcctcgagattgatgttctcttacaaaggcacaaaactccagccatctgcaacaatt
tttgagtcacttgtgcgtttaatgaatgcaggacagtccgatattgtgattgactcgtct
ttttgggatgaagagtacagaatatcatataacagaaacaaaagcgagaacatcccttct
acgagttcctgtaatactcggttattcgccgtgcaggaaaaacttgaacagtcaattgta
aaggacccgtttttctgtagtctattccttgggaagcttcctggcgatgtggatgaatct
gatccatcctacgacttgttatttacgctgaaagttctggaaggtcttaatcgtttttca
tatcagctgtcaatggatcagcagatatgcaaatttgctgaaggctacctccagaatttg
gatgacctgaaggtgacaatctctccgattccacagcatcagttcatgagtaaccttctg
acaaataagctggagctacaaatgcaagagaggttgtttgaagatgggctggtaccctcg
tggtgtgtctatctggcggaaacttgccccttcttattgtccttcagtgcacggtggaag
tacttttgcctgacagtgcatcgctcattcatgggagatgagacaagtattccggatggt
tcaagtactccagatgaggaaagtgctgcgcctgatgaggaagaagaggaaagtgatgct
caaaacgaggcaagtaaaaagaccaggaagcacaaagtaacgcgagataacatacttgaa
agtgctgcctctatgatgaccaaacatgggtcaagcaccaaaaccattgaggtggtattt
gtaggagaggttggcactgggcgaggcccgacctttgaattttacagtactgttagtcat
gaacttcagaggctcgggattgggatgtggagaggcgataataatgctcgaaaagcagga
gaagctggattcgttcgttctagctttgggctgtttccacagccatggtcctcagtaggc
acttcaacacgggggatcgaattatctgacgtggtaaaaaagttcaagcttcttggacat
gttgtagccagagcccttcttgatggaaggatcctggacatcccgctctcaaaagcattc
tacaagatcatgcttggccaggagcttgatatctacgatattccatcatttgatcctgag
ctgggcaaaactgtactggagtttcaagcactagttaaaaggaagaagttcttggagaaa
tcttcagagaagacacccaataggaatgcagatttgtcatataaaaatgtgagactggaa
gatttgtgcctggactttactcttcctggaaatcctgattatgagcttgttcctggaggc
tcagaaaagatagtgacacttgaaaatttggaggagtatgtaaatttgatagttgacgcg
acgttgaagagtgggattgtgaaacaggtcgaggctttcaagtctgcagttaacgaggtc
tttgctctcaagacccttagaatgttcgacgaggaagagatggagcggatactctgtggt
gaacaggattcttgggcttcaagcaaacttgaagatcacattgaattcgagcatggctac
gatgcgagcagtccaccaataaaaagtttcctggagatcttgcgggagtttgaaagagag
gaccagcgggcattcctccaattcaccaccggagctcctcagctcccacttggtggccta
gcttcactcgatccaaagctcaccgtcgtccgaaagcaatgtgacggcaacatcgacaac
gagttgccaagcgtcaacacttgccggcacttcatcaagcttcctccttactcctcgaag
gagataatgttaatgaagctcaaatacgctctggctgagggtttaggctccttccacttg
tcatga
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