Hordeum vulgare subsp. vulgare (domesticated barley): 123396210
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Entry
123396210 CDS
T11213
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00040
Pentose and glucuronate interconversions
hvg01100
Metabolic pathways
Module
hvg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123396210
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
123396210
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
123396210
NCBI-ProteinID:
XP_044947172
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Position
1H:complement(37079408..37086830)
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AA seq
420 aa
AA seq
DB search
MALGIYLFAKKPRDVQAWLRIEGDHVGRRQGREEATGQQGWLDYGAVGDGQQDDTRAFQK
AWADVCSSSQPATLVVPREKTYLVKQTTFLGNCKSPVTFRLDGKMVAPASRSAWPKENMR
WWIMFRDVDRLTVTGDGTIDGNGEMWWKTSCRVDKKLKCTDAPMALLLSKCNNLTVENIQ
LLNSQQIHMSVEDCQDVLLKGITITAPGDSPNNDGIHIARTKDIQVLDCDIKTGDDCMSI
ETGTENLYASRISCGPGHGISIGSLGDDNSEAQVSNITVYKAHLSGTTNGVRMKSWQGGK
GYAKDITFEDITMEDVHNPIIIDQNYCTSADPANPKPCKKQTSAVEFSNIQFKNIRGTSA
TEEAIKLDCSDTVPCHDILLQDVELTFRGHKHKHKHASATSVCNNVKLTESGSNVVPKTC
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctctcggcatatatttgtttgcgaagaagccgagagatgttcaagcttggctcaga
attgagggcgaccatgtgggtcgtagacaaggaagagaggaagctacgggacagcaaggt
tggttggactacggagctgttggcgacggccaacaggacgacacgcgggcgttccagaaa
gcatgggccgatgtctgctcctcgtctcagccggccacactcgtggtccccagggagaag
acgtacctcgtcaagcagaccactttcttgggcaactgcaagtcccctgtcaccttcagg
ctcgatggcaagatggtggcacccgccagccgatcagcatggcccaaggagaacatgagg
tggtggatcatgttccgcgatgtcgacaggctcaccgtgacaggcgacgggacaatcgat
ggcaacggcgagatgtggtggaagacctcctgtcgggtggacaagaagctcaagtgcacc
gacgccccgatggcgctgctgctcagcaagtgcaacaacctcacggtggagaacatccag
ctcctcaacagtcagcagatccacatgtcagttgaagactgccaggatgtgctcctcaag
ggcatcaccatcaccgcccccggcgacagccccaataacgacggcatccacattgctcgc
accaaggacatacaggtcctggattgcgacattaaaaccggcgacgactgcatgtccatc
gagactggaaccgaaaacctctacgcatcgagaatatcctgtggtccgggacacgggatc
agcatcgggagcttaggcgacgacaactctgaggcccaagtctccaacataacagtctac
aaggcgcacctctccggcacgaccaacggcgtgcgtatgaagtcatggcagggaggaaaa
ggatacgccaaggacattacgttcgaggacataaccatggaggatgtccataaccctata
atcattgaccaaaactactgcacatcggccgatcccgccaaccctaagccgtgcaagaaa
caaacttcagcggtggagttcagcaacattcagttcaagaacatacggggcacgagcgcg
acggaagaggctatcaagctggactgcagtgacaccgtcccatgccatgatatattgttg
caagatgtggagcttactttccgtgggcacaagcacaagcacaagcacgcttccgcaaca
agtgtgtgcaacaacgtcaagctaactgaatctggcagcaatgtagttcccaagacctgc
taa
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