Hordeum vulgare subsp. vulgare (domesticated barley): 123397235
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Entry
123397235 CDS
T11213
Name
(RefSeq) tryptophan synthase alpha chain-like
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00402
Benzoxazinoid biosynthesis
hvg00999
Biosynthesis of various plant secondary metabolites
hvg01100
Metabolic pathways
hvg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
123397235
00999 Biosynthesis of various plant secondary metabolites
123397235
Enzymes [BR:
hvg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
123397235
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
Ribul_P_3_epim
FMN_dh
IGPS
PcrB
BtpA
IMPDH
TMP-TENI
Motif
Other DBs
NCBI-GeneID:
123397235
NCBI-ProteinID:
XP_044947800
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Position
5H:548506471..548508470
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AA seq
332 aa
AA seq
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MCFALKASSPAPSLSHPMRRGTVAAVAVPAPGRPVVRTIAAAAVMSLEPAVTVPAPALAA
RPAAGKRGLSVAEAMSGVRANGKTAFIPYITAGDPDLATTAEALRLLDSLGANVIELGLP
CSNPSADGPVIQASAARALAAGATTDAVLSMLKEVTPELSCPVVIFSYFNPIVRRGTGSF
AAAAKEAGVKGIIIPDLPYDEMHAFRKEAIKNKLELILLTTPATPSERMKEITRASEGFV
YLVSVVGVTGARATINPCVKNLLQEIRQVTDKAVAVGFGISTSEHVNQIAEWGADGVIIG
SAMVKQLGEANSPREGLKRLDVYARSLKNALP
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcgcgctcaaggcgtcttccccggctccgtcgttgagccaccccatgcgtcgc
ggcacggtggccgcggtggcggtgcctgcgccgggcaggcccgtagtcagaacaatcgcc
gcggcggcggtgatgtcgctggaaccggcggtgactgtgcccgcgcccgcgcttgctgcc
aggcccgcggccggcaagcgcggcctgtcggtggcagaggccatgtctggtgtcagggcg
aatggcaagacagcgttcatcccgtacatcaccgccggcgaccccgacctggcgaccacg
gcggaggcgctcaggctcctcgacagcctcggcgccaacgtcatcgagctcggcttgccc
tgctctaacccctccgccgacgggccggtgatccaggcatcagctgcgcgtgcgttggcg
gccggcgcgaccacggacgccgtgctgtcgatgctgaaggaggtgacgccggagctctcc
tgccccgtggtcatcttctcttacttcaaccctatcgtgcgccgtgggacggggagtttc
gccgcggctgccaaagaagccggtgtgaaaggcattatcatacccgaccttccatacgac
gagatgcatgctttcaggaaagaagccatcaagaacaaactagagctgatcctccttaca
acaccagctacgccatcagagaggatgaaagaaatcacaagagcttcggaagggtttgtt
taccttgtaagtgtcgttggtgttacaggagccagggcgaccataaatccatgtgtgaag
aatcttcttcaggagattaggcaggtcacagacaaggcagtggcggtcggctttggcata
tcgacatcggaacatgttaaccagattgccgagtggggtgcagatggagtgatcattgga
agtgcaatggtgaaacagttgggtgaagcaaattctccaagagaaggactaaagaggctc
gatgtatatgccagaagtttgaagaatgcactcccatga
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