Hordeum vulgare subsp. vulgare (domesticated barley): 123397610
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Entry
123397610 CDS
T11213
Name
(RefSeq) homeobox-leucine zipper protein ROC6-like
KO
K09338
homeobox-leucine zipper protein
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123397610
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
123397610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
123397610
NCBI-ProteinID:
XP_044948079
UniProt:
A0A8I6Y0Y2
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Position
5H:complement(504660435..504666236)
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AA seq
776 aa
AA seq
DB search
MDGDWLEENSDLYNWLVLGFASGDNQVIQHDLGAETDGLLGDATNVSNTHAAAADQENGG
GQTNGDQRARTRHFRRRHTAEQILILEAAFEGYQHPDEKRRLELSRRTGLSAAQVQIWFQ
NRRNTGKNKAQKKETEEYQEENGRLQAEQQALISAMQNKICIPCRGEGTPEWHRLYAEHV
RLKDEQMRIAAFLNSVSGGRLQVINHTVVDTGNASAATDHDAVPPPSHHAPLTVTDPNPV
MFPDEGIAGDDDETAGRTLLLQHVVCALEELKVLVGLDAPLWSTPQGGEVEVINYREYLE
TMFPGMYERYEMDFCADATRKTGIISCTATDLVGILMDAEWWSQTFPGIVASATTSKIIT
PGDSGHGLAQLMTAELRVLSPLVPVRKINFIRHCQRLEENTWAVVDVSVDGILEQDGGQA
AALDDGAPSTHTACKLLPSGCRIQELENGYCQVTWIVNMVHDEATVPPLHHPLFRSGWAL
GASRWLASLQRRCEYIAFLHSSSNPTRSLNNRVAITPEGRKSVLEAAHRMTLRFYEAICG
PAALPWRSVNECRGRCGIGAERFEVVVRVVTSPVGGDATVLRATTTVWLPGTPPQLVFDY
LCDGDRRTEWDIVANGAPIRREGYFHTGQLHGNAVSLLRTIASNGATNKLILEESCVDAS
CMVLAYAPIDEQSMKDVMDGTHTPFSLLPSGVVVLPDGHAEPGPGGSPASAMCSSSSSTG
HKRNSGSLVSTMYQTLLSGHPPERLSKAVAGNVGKLLCDAIDKIKSAVHADVVLAA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggacggggattggctggaagagaacagtgatctgtacaattggcttgtcctcgggttt
gcaagcggagacaaccaggttatccagcatgaccttggtgctgagacggatggcctgctt
ggagacgccaccaacgtgagcaacactcacgcagctgctgccgatcaagaaaacggcggt
ggacagaccaatggtgaccagagggcgaggacacggcatttcaggcgccgtcacaccgca
gaacagatcctaatacttgaagctgcgttcgaaggataccagcatccagatgaaaagcgc
cggctggaacttagccggaggactggcctgagtgctgcacaggtccagatctggttccaa
aaccgacgcaacacggggaagaacaaggcccagaagaaggagacggaggaatatcaggaa
gagaatgggcggctacaagctgagcaacaagcactcatctcggctatgcaaaacaagatt
tgcatcccatgcagaggggagggtaccccggagtggcatcgcctgtatgccgagcatgtg
aggctcaaggacgagcagatgcgtatcgccgcctttcttaatagtgtctcgggaggaagg
ctacaagtgatcaaccacaccgtcgtcgacaccggcaatgcctcggcggcgactgatcac
gacgcagttccgccgccgtcccaccatgctcctctcacggtcacggatccaaatccagtg
atgttccctgacgagggcattgccggcgacgatgatgaaaccgctggaagaaccttgttg
cttcagcatgttgtttgtgctctggaagaattgaaggtgcttgtgggcttggatgcgccg
ttgtggtcaacaccccaaggtggcgaggtggaggtgatcaactacagggagtacctggaa
accatgttcccgggtatgtatgagcgctacgagatggacttttgcgcggatgccactagg
aagactgggatcatatcgtgcaccgccaccgacctcgtcggcatcctcatggacgcggag
tggtggtctcagacgttcccgggcatcgtggcaagtgccaccaccagcaagatcatcact
cccggtgattccggacatgggctggctcaactgatgactgcagagctgagggtgttgtca
ccgctggtgccggtccgcaagatcaacttcattaggcattgccagaggctcgaggaaaac
acatgggctgtggtggatgtgtctgttgatgggattcttgagcaggacggcggccaggca
gcggccctcgatgacggtgcgccttcaacacacacggcctgcaagcttctgccgagtggt
tgccgtatccaggagctggagaatggctattgccaggtcacatggatcgtgaacatggtg
catgatgaggccactgtcccgccgctgcaccatccactcttccgctccggctgggcactt
ggtgcgtcccgctggcttgcatccctccagaggcgatgcgagtacattgctttcctgcat
tccagttccaaccccactcgcagtctcaacaacagagttgctataacgcccgagggcagg
aagagcgtcttggaggcagcacatcgtatgacactgaggttctacgaagccatctgtggc
ccggcggccctgccatggagaagcgtcaatgagtgccgtggcagatgtggcataggcgcc
gagaggtttgaggtggttgtgcgcgtcgtgacttcacccgtgggtggagatgctaccgtg
ctgagagctacgacgacggtgtggctccccgggacaccgccacagctcgtgttcgactac
ctctgtgatggagatcgccgaaccgagtgggacatcgtcgccaacggtgcccccattcgc
cgggagggctattttcacactggacaactccatggcaacgccgtctctctcctacgcact
attgcttccaacggagcaaccaacaagctgatcctggaagagtcatgcgtcgacgcatca
tgcatggtgttggcgtatgctccaattgatgagcaatccatgaaggatgtcatggacggt
acccatacccccttctccctcctgccgtctggggtggtcgtactccctgatggccacgcc
gagccgggaccgggagggtctccagcttctgccatgtgctcctccagctcctccaccggt
cacaagcgcaattctgggtcgctcgtctctaccatgtaccagacactgctgagcggccac
ccaccagagcgtctctccaaagcggttgccggcaatgtggggaagctgctctgtgatgcc
atcgacaagatcaaatccgccgtccatgccgacgtggttttagcagcttga
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