KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123397621
Entry
123397621         CDS       T11213                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03083  Polycomb repressive complex
hvg04120  Ubiquitin mediated proteolysis
hvg04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123397621
   04120 Ubiquitin mediated proteolysis
    123397621
  09126 Chromosome
   03083 Polycomb repressive complex
    123397621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hvg04131]
    123397621
   04121 Ubiquitin system [BR:hvg04121]
    123397621
   03036 Chromosome and associated proteins [BR:hvg03036]
    123397621
Membrane trafficking [BR:hvg04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    123397621
Ubiquitin system [BR:hvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     123397621
   Cul7 complex
     123397621
Chromosome and associated proteins [BR:hvg03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     123397621
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     123397621
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 123397621
NCBI-ProteinID: XP_044948094
UniProt: A0A8I7BF26
LinkDB
Position
5H:complement(504920486..504923272)
AA seq 173 aa
MAADAASAAVKNLTLKSSDDEVFVVDVAVAMASQTIKHLVDDGCADNIIPLPNVSANILI
KVIDYCKQHVLNGDAAAAAADSSSTSTSVKPDEVNLKAFDEHFVKVDQTVLFDLILAANY
LEIKGLLDLTCQTVADMIKGKTPEEIRKTFNIVNDFTPQEEEEIRRENQWAFE
NT seq 522 nt   +upstreamnt  +downstreamnt
atggcggcggacgcggcatcggcggcggtgaagaacctcacgctcaagagctccgacgac
gaggtgttcgtggtggatgtggcggtggccatggcgtcgcagaccatcaagcacctggtg
gatgacggctgcgccgacaacatcatcccgctccccaacgtcagcgccaatatcctcatc
aaggtcatcgactactgcaagcagcacgtcctgaacggggacgcagccgccgccgccgcc
gactcctcctccacctccacctccgtcaagcccgacgaggtgaacctcaaggccttcgac
gagcacttcgtcaaagtcgaccagacggtcctcttcgacctcatcctggctgcgaactac
ctggagatcaaggggctcctcgacctgacctgtcagacggtcgccgacatgatcaagggc
aagactccggaggagatccgcaagaccttcaacatcgtcaacgacttcacaccgcaggag
gaggaggaaattcggagggagaaccagtgggccttcgagtga

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