Hordeum vulgare subsp. vulgare (domesticated barley): 123397622
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Entry
123397622 CDS
T11213
Name
(RefSeq) protein transport protein Sec61 subunit alpha-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03060
Protein export
hvg04141
Protein processing in endoplasmic reticulum
hvg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
123397622
04141 Protein processing in endoplasmic reticulum
123397622
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
123397622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123397622
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hvg02044
]
123397622
Membrane trafficking [BR:
hvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
123397622
Secretion system [BR:
hvg02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
123397622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
123397622
NCBI-ProteinID:
XP_044948095
UniProt:
A0A8I6YI07
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Position
5H:complement(484541709..484544635)
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AA seq
434 aa
AA seq
DB search
MTMRMASFNLFRLRPLAELLPEVESPTEVVPFRRKAAYTAGSLLVVLAGTQLPLYGIDTS
TAVHAPLYWFQTACAANCGTVMALGVIPLLLSEATSHLLLGLRIVNPIHENHLLLNGLQK
VLGVLISVVVPVGNALSMGHWSVGASILISLQVFVGSVIVIYLDEVLRKGYGLLPGIPLC
TTANVCATLLWRGFRDGKHGDLAASLGFFLLVCRLQGLHVALPLTRPRRSPDDVDAARFQ
ANYSIDISYLSYAPILFQAILLSWAYVFSEQLYMKYGGDKLVNLLGKWERSKTFGGFTPV
SGIAYYLTTPPTLADVARDPVHTCLYAALLLGGCAYVSTAWFVLCGYSKRYVARLVGHGV
SVTPAQADSIPFSRWSGRVAMVAFVVGLCVGALTLLAGFMRVTGSGTGIMLAVTGIYSFC
FNARASSGIGAIGF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcggatggcgagctttaatctcttccggctgcggccactggcggagctgttg
ccggaggtggagagccccacggaagtcgttcctttccggcggaaggcggcgtacacggcc
ggctcgctcctcgtcgtcctggcgggcacccagctcccgctgtacgggatcgacaccagc
acggccgtgcacgcccccctctactggttccagacggcctgcgcggccaactgcgggacc
gtcatggccttgggcgtgatacccctcctgttgtccgaggcgacctctcacctcctcctg
ggattaaggatagtcaaccccatccatgaaaaccaccttctcctgaacggcctgcaaaag
gtgctgggggtactaatctccgtcgtcgtgccggtcggcaacgcgctatccatggggcac
tggagcgtgggggcttcgatcctcatctcgcttcaggttttcgttggaagcgtcattgtc
atttatcttgatgaggtccttagaaagggttatggcctccttcctggcattccattgtgc
accaccgccaatgtttgtgcaactcttctctggaggggcttcagagatggcaaacatgga
gaccttgcggcgtcgcttggcttctttctgcttgtctgcaggttacaaggcttgcatgtc
gcgttgccactaacaaggccacggcgatcgccagatgatgtggatgctgctaggtttcag
gccaactacagcatcgacatatcctacctctcatatgctcccatcctcttccaagccatc
ctcctttcatgggcctatgtattctcagagcaattatacatgaaatatggcggagacaag
ctggtcaatctgctcggcaagtgggaacggtctaaaacttttggagggtttaccccagta
agcgggatcgcctactacctaaccacaccaccaaccttggctgatgtggcaagagacccg
gtacacacatgcctctatgccgccttgctgcttggcgggtgcgcttatgtatcgacggcc
tggttcgttctgtgcgggtattccaagagatatgtggcccggctggttgggcacggagtt
agcgtgacgcctgcgcaggcggactccattccctttagccgatggagcggccgtgtcgcc
atggtggcctttgtcgttggactatgcgttggggctctgaccctcctggcgggcttcatg
cgcgtcaccggttccggtactggaattatgctcgctgtcaccggcatatactctttctgc
ttcaacgccagagcttcttctgggatcggcgccattggattctga
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