Hordeum vulgare subsp. vulgare (domesticated barley): 123398509
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Entry
123398509 CDS
T11213
Name
(RefSeq) long chain acyl-CoA synthetase 8-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00061
Fatty acid biosynthesis
hvg00071
Fatty acid degradation
hvg01100
Metabolic pathways
hvg01212
Fatty acid metabolism
hvg04146
Peroxisome
Module
hvg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123398509
00071 Fatty acid degradation
123398509
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123398509
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hvg01004
]
123398509
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123398509
Enzymes [BR:
hvg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123398509
Lipid biosynthesis proteins [BR:
hvg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123398509
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of breast milk
123398509
Exosomal proteins of breast cancer cells
123398509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
123398509
NCBI-ProteinID:
XP_044948905
UniProt:
A0A287R7V7
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All DBs
Position
5H:complement(365295527..365307897)
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AA seq
734 aa
AA seq
DB search
MVQIWHKIMATITGKNPNMSILQRLSTSDLPLVKEYGLPGVIGALLMAIVIPILLSSMFS
KKVKKRAVQADVGGEAGLAMRNSRFSSLIQVPWEGATTMAALFEMASKKYTRHRCLGTRK
LISSEFIEAADGRKFEKLHLGEYEWNSYAEAFNRACNFASGLIKMGHQLDSRAAIFSDTR
AEWIIAAQGCFRQNLTVVTIYASLGEDALVHSLNETQVSTLICDSKQLKKLPAVSSKLHS
LKHVIYIEDEPVDADTLNQLKHLTALSFNAVEELGKTSHADARLPSSNDTAVIMYTSGST
GLPKGVMITHGNMVATIAAVRTIIPNLGTRDVYLAYLPLAHVFELAAESVMLASGVAIGY
GSALTMTDASNKIKKGTKGDVSVLKPTLMISVPAILDRIRDAVFKKVAEKGGIAKKLFDI
AYKRNLGAIEGSWSGSWAPERLIWNSIIFKPIRSMLGGHIRFILCGGAPLSSETQRFINI
CLGVPVGQGYGLTETCAGAAFSEWDDISVGRVGPPLPCCYVKLISWEEGGYRISDSPMPR
GEVVVGGYSITKGYFNNEAKTNEVYKVDERGIRWFYTGDIGQFHPDGCVEIIDRKKDIVK
LQHGEYVSLGKVESALQTSNYVDNIMVYADPFHSYCVALVVPPHQALEKWAQNSGISYKD
IEELCHNDQAIKEVQQSLSKAAKAARLEKFEIPAKIVLLPEPWTPESGLVTAALKLKREQ
LKTKFKDDLNKLYH
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatatggcataagatcatggcaacaattaccggcaagaatccaaacatgtcc
attttacaaagattgtccacaagcgatttgccactggtgaaagaatatggtttgcctgga
gttattggtgcccttttaatggctatagttatccctatcttgctttcttcaatgtttagc
aaaaaggtgaagaagagagcagtgcaagctgatgttggtggtgaagcaggccttgccatg
cggaacagtagattttcctctttaattcaagttccatgggagggtgccaccacaatggca
gctctgtttgagatggctagcaaaaagtatactcggcatcggtgtcttggcacaagaaaa
ttgattagtagtgaatttatagaagctgctgatggaaggaagtttgagaaactgcatctt
ggtgaatatgaatggaattcctatgcagaggcatttaatcgtgcatgtaactttgcttct
ggtctcatcaagatggggcaccagctagatagtcgtgctgctatcttttctgatactaga
gccgagtggatcattgctgctcagggttgctttcgacaaaatttaactgttgtgacaatt
tatgcatctctcggcgaggatgcactggtgcattcactaaacgagacacaggtttccact
cttatttgtgattcaaaacaacttaagaagctgcctgcagtcagctcaaagttgcatagt
cttaagcatgttatctacatcgaggatgaacctgttgatgctgacacacttaatcagctg
aagcacttgacagcgctatcttttaatgcggttgaggagttgggcaaaacatcacatgca
gatgcaagactaccatcaagcaatgatactgcagttattatgtatacaagtggaagtact
ggtctccccaagggtgtgatgattacgcatggcaacatggtggccacaattgcagcagtg
aggacaatcattccaaatcttggcacaagagatgtttatctggcataccttccgttggct
catgtttttgaactagcggcagagtctgtcatgttagcttctggtgttgctattggatat
ggctcagctttgacaatgactgatgcatcaaataagataaagaaggggacaaaaggagat
gtttctgtactgaaacctactcttatgatttcagttcctgcaattctggatcgcataaga
gatgcagtatttaagaaggttgctgaaaagggtggcatagccaaaaagctatttgatatt
gcatataaaagaaatcttggagcaatcgaagggagttggtctggatcttgggcgccagag
aggcttatatggaatagcattatcttcaaaccaatacgttcaatgcttggagggcatata
aggtttattctttgtggtggcgcacctctatcaagtgaaacacaaagattcattaatata
tgtctgggtgtcccagttggtcaaggctatggattgaccgagacttgtgctggagcagct
ttctctgaatgggatgacataagtgtgggtcgtgttggtccacccctcccttgttgctat
gttaagcttatttcgtgggaagaaggtggttatagaatttctgattctccaatgccacgt
ggagaggttgtcgttggtggctacagtataacaaaaggttatttcaacaatgaagcaaaa
acaaatgaggtgtataaggtggacgagaggggaatacgttggttttacactggagatatt
ggccagttccatcctgatggatgcgttgagatcatcgacaggaaaaaagatatagtaaaa
cttcaacatggagaatatgtatctcttggcaaggttgaatcagctctacagacaagcaat
tatgtggacaacatcatggtctatgctgatccatttcatagttactgtgttgcactggta
gtgccaccacaccaggccttggagaagtgggctcaaaattcagggataagctacaaagac
attgaggagctttgtcacaatgatcaagcaattaaggaggtccagcaatctctatcaaag
gccgcgaaagcagcaaggctcgagaagttcgagataccagccaagattgttttgctgcct
gaaccttggactccagagtctgggcttgtgaccgctgcgcttaagctgaagagggagcag
ctgaagaccaaattcaaagatgacctgaacaagctctaccactga
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