Hordeum vulgare subsp. vulgare (domesticated barley): 123398804
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Entry
123398804 CDS
T11213
Name
(RefSeq) chaperone protein ClpC2, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hvg03110
]
123398804
Chaperones and folding catalysts [BR:
hvg03110
]
Heat shock proteins
HSP100
123398804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
TniB
nSTAND3
NBD_SMAX1
AAA_14
Mg_chelatase
AAA_18
Zeta_toxin
NACHT
RsgA_GTPase
AAA_25
AAA_24
IstB_IS21
Torsin
Motif
Other DBs
NCBI-GeneID:
123398804
NCBI-ProteinID:
XP_044949193
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All DBs
Position
5H:complement(180345055..180365274)
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AA seq
920 aa
AA seq
DB search
MAGTLVLPVALETTFAGRTGGRHWKSHGTRRTPSMLAMSLNRPVRMAAFVGLRSVHSFSA
MCSSNFRSTVASYRFSRRGRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQ
VLLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFVAVEIPFTPRAKRVLELSL
EEARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADPSNIRTQVVRMIGETTEAVGAG
VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGREPQIERVVQILGRRTKNNPCLIGEP
GVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ
SDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHVEKDPAL
ERRFQPVKVPEPTVDETIEILRGLRERYEIHHKLRYTDDSLIAAAKLSYQYISDRFLPDK
AIDLIDEAGSRVRLRHAQVPEEARELDKELKQITKDKNEAVRGQDFEKAGELRDREMELK
AQITTLIDKSKEMTKAETESGETGPMVNESDIQHIVSSWTGIPVEKVSTDESDKLLKMEE
TLHKRVIGQDEAVKAISRSVRRARVGLKSPNRPIASFIFAGPTGVGKSELAKTLASYYFG
SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYSVVLFDEIEKAHP
DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDSDEKDSS
YGRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQLTKLEVKEIANIMLQEVFTRLKSKDINL
QVTEKFKERVVDEGYNPSYGARPLRRAIMRLLEDSLAEKILGGEVKEGDSVIVDVDSEGK
VIVLNGESGLPELPTPAVAV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaccttagtcctgccggttgctcttgagacaacttttgcaggccgtacaggc
ggtcgacactggaagtctcatggaaccaggaggactccctcaatgttggcaatgtcatta
aaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacatagcttctcagct
atgtgctcgtccaacttcaggtcaacagttgcatcttacagattctctagacggggaagg
cgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaagctataaaggtc
ataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaacagagcaa
gttctattgggtctggttggagaaggcactggtattgcggcgaaggtgcttaagtccatg
ggtataaatctgaaggatgcccgtgtggaagtggagaagatcattgggaggggcaacggt
tttgttgctgttgaaataccattcacaccacgtgcaaaacgtgttttagagctttcattg
gaggaagctcgccagctaggacacaactatattgggtccgagcacttgcttcttggattg
cttcgtgagggggaaggagtggcagctcgcgtacttgagtctcttggtgctgaccccagc
aatattcgtacccaggttgtccggatgattggtgagacaacagaagctgttggtgctgga
gttgggggagggagcagtggtaacaagatgccgacacttgaggagtatgggactaattta
acaaaactagccgaggagggaaagctagatcctgttgttgggagggaaccacagattgaa
cgtgttgtacaaattttgggcagaagaaccaagaacaatccctgcttaattggagaacct
ggtgttggtaagacagctattgcagaagggcttgctcagcgcatttctaatggcgatgtg
cctgagacgatagaggggaagaaggtcattacccttgatatgggacttcttgttgctggt
acgaaataccgtggagaatttgaagaacggttgaagaaactgatggaagaaatcaaacag
agcgatgagatcattctcttcatcgatgaagttcacaccctcataggagcaggagccgcc
gaaggtgctattgatgctgctaatattctaaagccagcattagcaagaggagaacttcag
tgtattggagccaccacacttgatgaatacaggaagcatgttgagaaagacccagcatta
gaaagacgtttccagccagtaaaggtaccagagccaactgttgatgaaaccatagaaatt
ctcagagggcttcgggaacgctatgagatccatcataaacttcgttacactgatgattct
ttgattgcggctgctaagctatcttatcaatatatcagtgatcgtttcctcccagataaa
gcaattgatttgatcgatgaagcaggttcacgtgttaggcttcgacatgcccaggttcct
gaggaagccagagagcttgacaaggagcttaagcaaataacgaaagataaaaatgaagct
gtccgtggccaggattttgagaaggctggagagttgcgagatcgtgaaatggaattgaag
gcccagataacgaccttgattgacaagagcaaggagatgactaaagcggagactgagtcg
ggagagaccgggccgatggtgaatgaatcagatatccagcacattgtgtcgtcatggact
ggtatcccggtggagaaagtctcaactgacgaatctgataaacttcttaagatggaagag
acattgcataagcgtgtcatcgggcaagatgaggctgtgaaagcaataagtcggtctgtt
cgccgtgctcgtgtaggactcaagagccccaaccgaccaattgcgagcttcatttttgca
ggtcccacgggtgttgggaaatcagagcttgcaaagactctggcatcatattacttcggc
tctgaagaagccatgatccggctggatatgagtgagttcatggagaggcacactgtgtcc
aagttgatcggttcaccaccaggctatgtgggatacactgaaggtgggcagctgacggag
gcggttcgacggcgaccatacagcgttgtgctttttgatgagattgaaaaagcgcatccg
gatgtgttcaacatgatgctccagatcctggaagatggaaggttaactgacagcaagggg
agaacagtggacttcaagaacacgcttctgataatgacatcaaatgttggaagcagcgtg
attgagaagggagggaggaagattgggttcgacctcgactcagacgagaaggacagcagc
tatggcaggatcaagagcttggtggtcgaggagatgaagcagtacttccgaccggagttt
ctcaaccgtctcgacgagatgatcgtcttcagacagctgaccaagctggaagtcaaagag
atcgcgaacataatgctgcaggaggttttcaccaggctgaagagcaaggacatcaacctg
caggtgacggagaagttcaaggagcgggtcgtggacgaagggtacaaccctagctacgga
gcgcggccattgaggagggcgatcatgaggcttctggaggacagccttgcggagaagatt
ttgggcggggaggtcaaggagggcgactctgtgattgttgatgtggactcggaggggaaa
gtcattgtgctgaatggcgagagcggactgccggagctcccaaccccggcggttgctgta
taa
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