Hordeum vulgare subsp. vulgare (domesticated barley): 123398886
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Entry
123398886 CDS
T11213
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hvg01002
]
123398886
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123398886
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123398886
Peptidases and inhibitors [BR:
hvg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123398886
Ubiquitin system [BR:
hvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123398886
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Peptidase_C12
Motif
Other DBs
NCBI-GeneID:
123398886
NCBI-ProteinID:
XP_044949266
LinkDB
All DBs
Position
5H:complement(465649321..465665027)
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AA seq
948 aa
AA seq
DB search
MASFVAVLVAIMVVALVAVMRRAAARKEDAERTAWLAAEQAQFAERDAFYYYDHHAAPHW
TAPDTTQWTAPQVAWPPVNQVAAMRLAWPPVEQMEAPPVAWPPVEQAAASQVDWPPVKKV
AAPQVVWPPVLKVMAPQVAWPPVEQVAWPPVDQVAGPEVAWPRDEQVAAPRLEQEEHEAA
TEPMLAAAAGKKGPCAVCRTPTTFRCKRCKSVKYCAVKCQIAHWRQGHKDECHPLSADAR
EDTTIKASSTKKIERTSSDEESVVTGVEQAVESKEMPLEKASNTSEASQHDGAEFTFPQV
TGHAESADCSGSPTFGKSCKVEGASVIENGSHTQIPVACDPSEKADDLPESSVKSEIRVV
VPDNLPTTKSLIRQQTAPTVVRHYPSESMCQTLFPYELFVKLYNFDKVELRPFGLCNLGN
SCYANVVLQCLAFTRPLTAYFLEGLHSKKCSQKEWCFLCEFEKLIVEGKQGQSQLSPTGI
LSHLSDIGNSFGPGKEEDAHEFLRYAIDTMQSASMKEANANGAHKLSEETTLIQLMFGGY
LRSKIKCTKCGVSSEHCERILDLTVEIDGDISTLEEALHRFTSSEVLDGDNRYHCTRCKT
YERGKKKLTISEAPNILTIALKRYQSGMFGKINKAIRFPEYLNLSSYMSATDDCSPVYRL
YAVVVHRDVMDSSVSGHYVCYVKDSQGKWYEMDDSQVKRVSLKNVRSECAYMLLYARCSP
RAPRSLRKLIIGQGLSHTKKARKTTDPEPTCSEGQSYFSRHQGAQSQSCRDHAVNGHTYR
LVNNTLNPVLESTSTSEDSSLFSHSDAGSSGNLSSDNTDSTTNPGGSKEYAYISGSSDQM
HPLSRVVSPQEHSRQMSSLNPSSSTQYADQGEVDKLQQLKHQASKGVWDEGCEGPAFFYV
DQGKYSNSSSRHRCSISSSSSCNLTGQRGRRMVGEVDHGPAEGQGHFK
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttcgtcgccgtgctggtggcaatcatggtcgtggcgctggtggcggtgatg
cggcgcgcggccgcgaggaaggaggacgcggagaggacggcctggctcgcggcggagcag
gcccagttcgcggagcgcgacgcgttctactactatgatcaccacgccgcgcctcactgg
acggcgccggacacgactcagtggacggcgccgcaggtggcctggccgccggtcaaccag
gtggcggcgatgcggctggcctggccgccggtcgaacagatggaggcaccgccggtggct
tggccgccggtcgagcaggcggcggcgtcgcaggtggattggccgccggtcaagaaggtg
gccgcgccgcaggtcgtctggccgccggtcttgaaggtgatggcgccgcaggtggcctgg
ccaccggtcgagcaggtggcttggccgccggtcgatcaggtggcggggcctgaggtggcc
tggccgcgggacgaacaggtggcagcgccgcggctcgaacaggaggaacatgaggcggcg
acggagcctatgctagcggcggcggcggggaagaaagggccgtgtgcggtgtgccggacg
ccgactacgttcaggtgcaagcgctgcaagagcgtcaagtattgcgccgtcaaatgtcag
atagctcactggagacaaggacacaaagatgaatgccatccactcagtgctgatgctaga
gaagacaccacaataaaagcttcttccacgaagaaaattgaacgcactagctcagatgaa
gaaagtgtggtgaccggagtcgagcaagcagttgaaagcaaggagatgccccttgagaag
gcgtccaatacgtcagaggcttctcagcatgatggcgcagagttcacatttcctcaggtt
acaggacatgctgaatctgctgactgttcgggttctccaacttttggtaaatcgtgcaaa
gtcgagggcgcttccgttattgaaaatggctctcacactcagattccggtagcgtgtgat
ccatctgaaaaggctgatgatcttcctgaatcctctgttaaatcagagatcagagttgtg
gtgccagataatctaccaacgacgaaaagtttgatcaggcaacaaactgctccaacagtc
gtgaggcactatccatcggaatcgatgtgtcagacactttttccgtatgaacttttcgtc
aagctctacaactttgacaaggtggaattgcgtcctttcggtctttgtaaccttgggaat
agttgctatgcaaatgtcgtgcttcagtgtttggcctttacccgaccacttacagcgtac
tttctcgaggggcttcattcaaaaaaatgttcccaaaaggaatggtgcttcttatgcgag
tttgaaaaactgattgtggagggtaagcaaggacagtctcaattatcacctactggaata
ctctcacatttgtctgacatcggaaatagctttggcccgggtaaagaggaagacgctcat
gagtttctcaggtacgcaattgatactatgcaatctgctagcatgaaggaagccaatgca
aatggtgcccataagttatctgaagaaacaacactgattcagctaatgttcgggggctat
ctacgatctaagataaaatgcacaaagtgtggggtcagttcagaacattgcgagcgtatt
ctggatcttactgtggaaatagatggggatatcagtactcttgaagaagcacttcatcga
tttacatcttcagaagtcttagatggcgataatagataccattgtaccagatgcaagacg
tatgaacgtggcaaaaagaagttgacaatatcagaagcaccaaatatcctgactattgca
ctgaaaagatatcagtctggtatgtttggcaagattaataaagccatcaggttcccggag
tacttgaatttgtctagctacatgagtgcaacagatgattgttcccctgtgtacaggctc
tatgctgtggttgtccatcgtgatgttatggattcatccgtttctggtcattatgtatgt
tatgtcaaggactcgcaggggaaatggtacgaaatggatgacagccaggtgaaacgtgtt
tctctgaaaaatgtccggtcggagtgtgcatatatgctgctttacgcaaggtgttcgcca
cgggctccgaggtctctaaggaaattgattattggtcaaggcctatcacacacaaaaaaa
gctaggaagacaacagatccagaaccaacttgctcggaaggacagagttactttagcagg
catcaaggtgcgcaatcgcagtcttgcagggatcatgcagtgaatggccacacctacagg
ctggttaacaacacattgaacccagtattagagtccacaagtacaagcgaggattcttcg
ttgttcagccattctgatgcaggttcaagcggcaatttaagcagcgataacactgacagc
acaacgaacccaggcggcagcaaggagtatgcttacatatctggaagctcggatcaaatg
cacccattaagcagagtggtttcgcctcaggagcattcccgccagatgtccagcttgaac
cctagctcttcaactcaatatgctgatcaaggtgaggttgataagctgcagcagctcaag
catcaggcaagcaaaggggtttgggatgagggctgtgagggcccagccttcttctatgtt
gaccaaggtaaatatagtaacagtagcagcagacataggtgcagtattagcagtagcagt
agttgtaatttaacaggacagcgtggccgtaggatggtaggggaggttgatcatggccct
gcagagggccaggggcattttaagtag
DBGET
integrated database retrieval system
