Hordeum vulgare subsp. vulgare (domesticated barley): 123398959
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Entry
123398959 CDS
T11213
Name
(RefSeq) transcription factor IIIA-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123398959
03021 Transcription machinery [BR:
hvg03021
]
123398959
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123398959
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
123398959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-H2C2_2
zf-met
zf-C2H2_jaz
DUF7565
CCAP
LANA1_DNA-bd
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
123398959
NCBI-ProteinID:
XP_044949363
UniProt:
A0A8I6WZN9
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Position
1H:27506370..27509805
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AA seq
381 aa
AA seq
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MGEADPDGGGVLGATVTSAAAAPVRDIRRYKCEFCGVVRSKKRLIRDHVLEHHKDEAGGL
DEYDVGGGGGGGGGAPGKGIGHDCKECGARFKKPAHLKQHMQSHSPERPFACHVDGCPFS
YSRKDHLNRHLLTHEGKLFICPVEGCNHKFSIKGNIQRHVQEFHKDGPQFGGKKEFICPE
ANCGKAFKYASKLQKHEESHVKLDYTEVICCEPGCMKTFTNVECLKAHNQSCHQYVQCDT
CETKQLKKNFKRHQRMHEGSLVTERINCSFKDCKHSFSKKSNLHKHIKAVHEQSRPFTCG
FSGCGQKFSYKHVRDNHEKSSVHVLFESDFVEADEQLRPHPGGRKRKPISVDTLMRKRVA
APDAPPAYSDGTEYLRWLLSG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagcagatcctgacggtggcggcgtcctcggagcgacagtgacctcggcggcg
gccgcccctgtgagggacatcaggcggtacaagtgcgagttctgcggcgtcgtgcgctcg
aagaagcggctgatccgagaccacgtcctcgagcaccataaggacgaagcgggtggcctg
gatgagtacgacgtaggtggtggtggtggcggtggcggtggcgcgccgggcaaggggatc
ggccatgattgcaaggagtgcggcgcgaggttcaagaagccggcgcatctgaagcagcat
atgcagagccattctcccgagagaccctttgcctgccatgtagatggttgccctttcagc
tatagcaggaaggaccatttgaaccgccatctgcttactcatgaaggaaaactattcata
tgccctgtggaaggatgtaaccataagttcagtatcaagggtaatattcagagacatgtt
caggaatttcacaaggatggccctcaatttggaggcaagaaagagttcatctgcccagag
gctaactgtgggaaagcgttcaaatatgcttccaagctacagaaacacgaggaatcacat
gtcaagttggattacactgaagttatctgctgcgaaccaggctgcatgaagacttttact
aatgtggaatgcctcaaggcccataaccaatcttgtcatcagtatgttcagtgtgatacc
tgtgaaactaaacagcttaagaagaacttcaagcggcatcagcgaatgcatgaaggttcg
cttgtcactgagaggattaactgcagcttcaaggattgcaagcactcattttcaaagaaa
tccaatttgcacaagcatattaaggcggttcatgagcagagtagacctttcacatgcgga
ttctctgggtgtggccagaagttttcatacaagcatgtaagggacaatcatgagaaatct
agtgttcacgtgctttttgagagcgatttcgtggaggctgatgagcaactccgacctcat
ccaggtggccgcaagaggaagcccatttcagttgatacattgatgcggaagagggtagct
gctcctgatgctcctcctgcttacagtgatggaactgagtatctgagatggcttttgtca
ggttga
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