Hordeum vulgare subsp. vulgare (domesticated barley): 123399105
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Entry
123399105 CDS
T11213
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hvg01003
]
123399105
Enzymes [BR:
hvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
123399105
Glycosyltransferases [BR:
hvg01003
]
Polysaccharide
Structural polysaccharide
123399105
SSDB
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GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
123399105
NCBI-ProteinID:
XP_044949461
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All DBs
Position
5H:complement(470993719..470997010)
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AA seq
531 aa
AA seq
DB search
MGAGGKAGKARRAARVSLWVARASTTVLLWTCVVVLLAAAFGEHLAPSVLGLGGVWSGCL
AQTLVIVQRPLLLPADRERVAATATATAVALPLPPKRIYKNNGYLMVSCNGGLNQMRAAI
CDMVTVARYLNVTLIVPELDKTSFWADPRSAFLCAVTAILNNSVKDCICLILFCCFAYSE
FRDIFDVDYFIASLRDEVRILKELPPRLKKRVEQGYLRSMPPVSWSDISYYNNQILPMIK
KYKVLHLNKTDARLANNGLPMEIQKLRCRVNFDALRFTPEIEELGRRVVQILRQNGPFVV
LHLRYEMDMLAFSGCTHGCSNEEAEELTRMRYAYPWWKEKVIDSNAKRKDGLCPLTPEEI
AMVLKALDIDRNYQIYIAAGEIYGGQRRMAALTSAYPNVVRKETLLPSGLRFFQNHSSQM
AALDYMVSLESDVFIPTYDGNMAKVVEGHRRYLGFKKTVLLDRKLVVELVDEYKNGTLSW
SDFSSSVKASHTSRMGAPSRRQVIPDKPKEEDYFYANPHECLHQPDELSAL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccggagggaaggccgggaaggcgcggcgggcggcgcgggtgagcctctgggtg
gcgcgcgccagcaccaccgtgctgctctggacctgcgtcgtggtgctgctcgcggccgcc
ttcggggagcacctggcgcccagcgtgctgggcctgggcggggtctggtccggctgcctc
gcgcagacgctcgtcatcgtgcagcgcccgctgctgcttccggcggaccgcgagagggtc
gccgccaccgccaccgccaccgcggtcgcgctgccgctgccgcccaagcgaatctacaag
aacaatggctatctgatggtgtcctgcaatggcggtctcaaccagatgcgcgcagctata
tgcgatatggtgacggttgcaagatacttgaatgtcacactcatcgtgccggagttggat
aaaacttcattctgggctgatcctaggtcagcatttctatgtgcagtcactgcaattctt
aacaattcagtgaaggactgcatttgccttatccttttctgttgctttgcctatagcgag
ttccgagatatatttgatgtggactacttcatagcatcattgagagatgaggtccggata
ctgaaagagctgcctccacggctgaaaaagagagttgaacaggggtatcttcgctccatg
ccacccgtcagctggtctgatatatcctattacaataatcagattttaccaatgataaag
aagtacaaggtccttcatctgaataaaacagatgctcggcttgcaaataatggcctaccc
atggagattcagaaactgaggtgccgtgtcaattttgatgcgctgagatttacccctgaa
attgaagagctgggcaggcgtgtggttcaaattcttcgtcagaatggaccctttgtggtt
ctccacttgcggtatgagatggacatgcttgccttctccgggtgtacacatggttgcagc
aatgaggaggctgaggagctcacaagaatgagatacgcttacccatggtggaaagagaaa
gtgatcgactccaatgcgaagaggaaagacgggctctgtccattaacaccggaggagatt
gcgatggtattaaaggcactcgacattgatcgcaattatcaaatatatattgctgctggt
gaaatatatggtggacaaagaagaatggctgcactgacctcagcttatcccaatgtggta
agaaaagagacgttactgccttcgggactcaggtttttccagaaccattcttcccagatg
gcagcattggattatatggtgtccttggagagtgatgtgttcatccccacttatgatggc
aacatggcaaaagttgttgaaggccatcgcagatacttgggattcaagaagacagtgcta
cttgaccggaaacttgtagttgaactcgttgatgagtacaaaaacggcacattgagctgg
tccgatttctcctcctctgtgaaggcatcacacaccagccgcatgggcgcgccatccagg
aggcaggtgattcctgacaaacccaaggaagaggactacttctacgcgaatcctcatgag
tgcttgcaccaaccagatgagctatcagctctatga
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