Hordeum vulgare subsp. vulgare (domesticated barley): 123399303
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Entry
123399303 CDS
T11213
Name
(RefSeq) tRNase Z TRZ2, chloroplastic-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvg03016
]
123399303
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
123399303
Transfer RNA biogenesis [BR:
hvg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
123399303
Prokaryotic type
123399303
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Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
123399303
NCBI-ProteinID:
XP_044949652
UniProt:
A0A8I6Y393
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Position
5H:complement(475656660..475660083)
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AA seq
359 aa
AA seq
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MATSTSLFSLAPLRLTHRRLLSPTLGTASRFQTLASKRAAAPTVSGPGGGAGSGLLSVLD
RALTDEEEYRRARAQVQRKGVEAEGYAIEGISVGGHETCVTVPSLNVAFDIGRGPLFAVR
QDHLFITHAHLDHIGGLPMYIATRGLYNLKPPTVFVPPCIRDDVEEMLQIHRRMSRIELE
VELVALDLGETYEIRNDLVARPFQTHHTVPSQGYVIYSVRRKLKKQYAHLKGSQIVKLKQ
SGSEITDTILYPEVAFTGDTTSDFILDPRNADALRAKVLITEATFLDDQVDVDHAREHGH
MHLSEIMEHSQWFRNEAIILTHFSNRYSLEDIRKAVSRLQPKLLSKVVALTEGFKSEYS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccacctccctcttctccctcgccccgctccgcctcacgcaccgccgcctc
ctctcccccaccctcggcacggcctcccgcttccagacgctcgcctcgaagagggcggct
gcccccaccgtctccgggcccggcgggggcgcggggagcgggctgctctcggtgctcgac
cgggcgctcaccgacgaggaggagtaccgccgcgcgcgcgcccaggtgcagcgcaagggc
gtggaggcggaggggtacgccatcgaggggatctcggtgggcgggcacgagacctgcgtc
accgtgccgtccctcaacgtcgccttcgacatcggccgcggcccgctcttcgctgtgcgc
caggaccacctcttcatcacccacgctcatctcgaccacatcggtggtcttccaatgtat
atagcaacccgtgggctctacaatttgaaacctccaaccgtatttgtacctccgtgtata
agggatgatgttgaggagatgcttcagatccatcgtagaatgagtcgaattgagctggaa
gttgaattagttgctcttgatttgggagaaacatatgaaatacgcaatgaccttgttgcc
agaccatttcagactcaccatactgtgcccagccagggctacgtcatatactctgttcga
agaaagttgaaaaaacaatatgctcacttgaagggaagtcaaatagtaaaattaaagcaa
tcaggctctgagattacagataccatactgtacccagaagttgccttcaccggagataca
acatctgattttattcttgacccacggaatgcggatgccctgagagcaaaggttcttata
acggaggcaaccttcctagatgaccaagtcgatgttgatcatgctcgagagcatggccac
atgcatctatctgagataatggagcattcccaatggtttagaaatgaggcaattatactc
acccatttctcgaatcgatatagtcttgaggatatccggaaagctgtttccaggctacag
ccgaagttactttcgaaggttgttgctctgacagaaggcttcaaatctgaatatagctaa
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