KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123399446
Entry
123399446         CDS       T11213                                 
Name
(RefSeq) splicing factor U2af small subunit A-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123399446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hvg03041]
    123399446
Spliceosome [BR:hvg03041]
 Complex A
  U2 snRNP components
   U2 related factors
    123399446
 Complex B
    123399446
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 RBD_AKAP-17A Torus
Other DBs
NCBI-GeneID: 123399446
NCBI-ProteinID: XP_044949790
LinkDB
Position
5H:479475342..479477125
AA seq 314 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITP
GVDAQGNPINPVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIGNVYVQFREED
QAAKALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKQIGRDL
RKRLYGHLHSSRRSHSRSSRSPSPYRHHARDRDRSSRSKDRGDYYGGSLDRGDYGDYYHH
SRRSSERNRNYDSDGSRRRRHRSRTRSPVREGSEERRAKIEQWNRERDAPARQGSEERRA
KIEQWNRERETAQA
NT seq 945 nt   +upstreamnt  +downstreamnt
atggccgagcacctcgcgtcgatcttcggcaccgagaaggaccgcgtgaactgcccgttc
tacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaagccg
tccgtctcgccgacgctgctgctctgcaacatgtaccagcgccccgacatgatcaccccg
ggggtggacgcgcagggcaaccccatcaaccccgtcaagatccagggcgacttcgaggac
ttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctgcacgtc
tgcgacaacctcgccgaccacctgattggcaacgtctacgtgcagttcagggaggaggac
caggctgccaaggccctccaggcgctgcaggggaggttctactcgggccgccccatcatt
gccgagttctcgccggtcaccgacttccgggaggccacctgccggcagttcgaggagcac
aactgcaaccgtggaggatactgcaacttcatgcatgtcaaacagattggcagggacctg
aggaagaggctgtatgggcacctgcatagctccaggaggagccacagcaggagcagccgg
agcccaagcccctaccgtcaccacgccagggaccgtgatcgctcctcacggtctaaggac
cgtggcgattactatggaggcagcctggaccgtggtgactatggcgactactaccaccat
agccggaggagcagcgagaggaatcgcaactatgacagcgatgggagcaggcgccggcga
cacaggtctagaactaggagcccggtcagggagggcagcgaggagaggagggcgaagatt
gagcagtggaaccgtgaaagggatgcgcctgccaggcagggcagcgaggagaggagggcg
aagatcgagcagtggaaccgtgaaagggagacggctcaggcctga

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