Hordeum vulgare subsp. vulgare (domesticated barley): 123399574
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Entry
123399574 CDS
T11213
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00900
Terpenoid backbone biosynthesis
hvg01100
Metabolic pathways
hvg01110
Biosynthesis of secondary metabolites
Module
hvg_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
123399574
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hvg01006
]
123399574
Enzymes [BR:
hvg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
123399574
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
123399574
2.5.1.29 geranylgeranyl diphosphate synthase
123399574
Prenyltransferases [BR:
hvg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
123399574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
123399574
NCBI-ProteinID:
XP_044949912
UniProt:
A0A8I6YMW7
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Position
5H:580809286..580810506
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AA seq
333 aa
AA seq
DB search
MDKVACCCLQNGGPPPPSLLVPPCRRSISFTRRIPERGNTKLRAGFSSLDLEQYMSANVK
VVQEALERALPVGQPERLRESMRYSVLACGCGKRVRPVLAIAACELVGGSRAVATPVACA
VEMVHAWSLIRCDMTCMSDAAAFRRDRPANHVAFGEYTALYSGGTLLALAFEHLVRCADL
GAVPAERALWAVAELGNAAGAGGVAAGMLADKASEGAPVSLAMLEYIHLHKTARLFEAAA
VCGAIVGGGTEGEIESVRRYARSVGVLFQVANDVSGSGKAADKATYQTLLGVDQAQAYAA
ELVVKAQRELERFNANRAVPLHHLASFIAYRQK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtggcatgctgctgcctccagaatggaggaccgccaccgccctcactgcta
gtgccaccgtgcaggcgttccatctccttcacccgccgcatccccgagagaggcaacacg
aagctgcgagctgggttcagtagcttggacttggagcagtacatgtctgccaacgtgaag
gtcgtgcaggaagcgctcgagcgggccctgcctgttgggcagccggagcgcctccgcgag
tccatgcgctactccgtcctcgcttgcggttgcgggaagcgggtgcgccctgtcctcgcc
atcgctgcgtgcgagctcgtcggcggctctagggcagtggccacccccgtcgcctgtgcc
gtggagatggtccacgcatggtcgctcatccgctgcgacatgacgtgtatgagcgacgcc
gccgcctttcgccgcgaccggcctgctaaccacgtcgcgtttggcgagtacaccgcactc
tactccggcggcacgctcctcgcgcttgcgttcgagcaccttgtccgctgcgccgacctc
ggtgctgtccctgcagagcgcgcgctgtgggccgtggctgagctcgggaacgctgcgggt
gccgggggcgtggctgcgggaatgttggccgacaaggcgtcggagggcgcgcctgtgagc
ctcgccatgctggagtacatccacctacacaagaccgcgcggctattcgaggctgcggct
gtgtgcggcgccattgtcggcggaggtacggagggcgagatcgagagcgtccggcggtac
gcgcgctctgtcggcgtccttttccaagtggccaacgacgtatccgggtccgggaaggca
gccgacaaggccacgtaccagacgctgctgggtgttgaccaagcgcaggcttacgcggcg
gagctcgtggtgaaggcccagcgcgagctcgagcggttcaatgccaaccgcgccgtgccg
ctgcaccatctcgcgagcttcattgcctacaggcagaagtga
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