Hordeum vulgare subsp. vulgare (domesticated barley): 123399694
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Entry
123399694 CDS
T11213
Name
(RefSeq) transport inhibitor response 1-like protein Os11g0515500
KO
K27740
protein auxin signaling F-box 2/3
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123399694
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Motif
Pfam:
Transp_inhibit
F-box_5
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
123399694
NCBI-ProteinID:
XP_044950022
UniProt:
M0WJ49
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Position
5H:complement(485303913..485309835)
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AA seq
568 aa
AA seq
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MPYFPDEVVEHILGFVSSHRDRNAASLVCHAWYRVEGLTRRSVFISNCYAVRPERVHARF
PCLRSLTVKGRPCFADFNLVPAGWGATAEPWVDACARTCPGLEELRLKRMVITDDCLNHL
ARSFPNLRSLVLVSCEGFSTDGLATIATNCRFLKELDLHGSQVEFRGPHWFSCFPKPSTS
LESLNFACLDGTVSANALESLVARSPNLKSLRLNRAVPAAVLANILTSAPKLVDLGTGLV
AQNNNADALSLYNAIQQCSSLNSLSGFWDSPRWITPVIHYICKNLTCLNLSYAPTFQTAD
LIGAIRHCQNLRHLWVLDHIGDAGLKVVASCCLELQELRVFPANADVLASTDVTEEGLVA
VSSGCRKLSSVLYSCSRMTNSALITVAKNCSRITSFRLRICLHGSVDAVTGQPLDEGFGA
IVRSCKGLRRLSMSGLLTDSVFLYIGMYAERLETLSVAFAGDSDDGMIYVLNGCKNLRKL
EMRNCPFGDTALLAGMHRYEAMRSLWMSSCDITLGGCRSLAATMPNLNVEVVSQVDGVSC
DAKKVEKLYVYRTLAGPRGDAPGFVSAL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgccctactttccagacgaagtggtggagcacatccttggcttcgtgtcgtcgcatcgt
gaccgcaacgctgcatctctcgtgtgccacgcgtggtaccgcgtcgagggcctcactcgc
cgctccgtcttcatttccaactgctatgcggtgcgccctgagcgagtgcacgcacgtttc
ccctgcctgcgctcgctgaccgtgaagggcaggccatgttttgctgacttcaaccttgtc
cccgcggggtggggtgccacagcggagccatgggtggatgcatgtgcccgtacatgccct
ggccttgaagagctccgcctgaagcggatggttatcactgatgattgcctcaatcacctt
gcccgttcattccccaatttgaggtcactagtccttgttagctgtgaggggttcagcacg
gatggtcttgctactattgccaccaattgcaggtttctcaaggaacttgacttacatggg
agtcaggtggagtttcgaggccctcattggtttagttgtttccccaagccttcgacatca
ttagaatccttgaattttgcttgcttggatggaacagtgagtgctaatgcattggaaagt
cttgttgcaaggagtccaaatcttaaaagcttaaggttaaatcgtgcagttccagcagct
gttttagccaacattcttacttccgctcctaagctggtggatttaggtactggattggtt
gctcaaaacaataatgctgatgcactcagtctctacaatgctattcaacaatgcagttct
ctgaatagtttgtctggcttttgggattctccacgttggattactccagtaattcattat
atttgcaagaacctaacatgcttgaaccttagctatgctccaacgtttcagacagctgat
cttattggagctattcgccattgtcagaatctccgacacttgtgggtactagatcacatt
ggcgatgcaggattgaaggttgtagcctcttgttgcctggagctgcaagagttgagggta
tttcctgcaaatgcagatgtgttagcaagcactgatgtgacagaggaagggctggttgca
gtatcttcaggctgtcggaagctaagctctgttctctattcctgcagccgaatgactaat
tctgctctgattacggtggcaaagaattgctcgcgaatcacatccttcagactgcgtatc
tgcttgcatgggtcagtggatgccgtgacaggccagccactggatgagggttttggggca
atcgtccggtcatgcaagggcctcaggcgtctatctatgtctggccttctcacggacagc
gtgttcctgtacatcggcatgtacgctgagaggctggagacgctctctgttgcgtttgca
ggagatagtgatgatggcatgatctacgtgctcaatggctgcaagaatctgaggaagctg
gagatgagaaactgcccgtttggcgacacggcgcttcttgcaggcatgcacaggtacgag
gcgatgcgctctctttggatgtcgtcgtgcgacatcaccctgggtggctgcaggtccctc
gcggcaaccatgccaaacctaaacgtcgaggtcgtcagccaggtggatggagtctcgtgc
gatgcaaagaaggtggagaagctgtatgtctacaggacactcgccgggccgaggggtgat
gcccctggattcgtctcggcactgtaa
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