Hordeum vulgare subsp. vulgare (domesticated barley): 123399786
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Entry
123399786 CDS
T11213
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123399786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123399786
03009 Ribosome biogenesis [BR:
hvg03009
]
123399786
04131 Membrane trafficking [BR:
hvg04131
]
123399786
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123399786
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123399786
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123399786
Membrane trafficking [BR:
hvg04131
]
SNARE
SNARE associated proteins
Others
123399786
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123399786
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123399786
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_33
CDC48_2
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_28
Parvo_NS1
Mg_chelatase
nSTAND3
AAA_17
AAA_7
AAA_18
ATPase_2
NB-ARC
IstB_IS21
ABC_tran
nSTAND_NTPase5
AAA_lid_PRS2_C
DUF815
TsaE
Sigma54_activat
ResIII
AAA_24
NACHT
Viral_helicase1
SLFN-g3_helicase
Zeta_toxin
Vps4_C
Zot
Motif
Other DBs
NCBI-GeneID:
123399786
NCBI-ProteinID:
XP_044950107
LinkDB
All DBs
Position
1H:complement(412638143..>412640191)
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AA seq
682 aa
AA seq
DB search
LIDDTVQGMTGNLFDAFLRPYFLEAYRPLRKGDLFLVRGGMTSVEFKVVETDPAEYCIVA
PDTEVFCDGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP
KGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALR
RFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVELEHVSRDTHGYVGADLAALCTEA
ALQCIREKMDIIDLEDDTIDAEILNSMAVTNDHFKIALGTSNPSALRETMVEVPNVSWED
IGGLESVKRELQETVQYPVEHPEKFEKFGMAPSKGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATKRGSSVGDAGGAAD
RVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVESRLQIFR
ACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDMEKERRRKDNPE
AMEEDEVDEIRAAHLEESMRYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFPDRPVGG
ATAAADPFASAATAAEEDDLYS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
ctcatcgacgacaccgtccaagggatgaccggaaacctgttcgacgccttcctgagaccc
tacttccttgaggcctaccgtccgctcagaaagggagacctgttcctggtgagaggcggc
atgacgagcgtggagttcaaggtcgtggagaccgaccccgcggagtactgcatcgtcgct
cctgacacggaggttttctgcgacggcgagcctgtcaagagggaggacgaggagaggctc
gacgacgtcggctacgacgatgtcggcggagtcaggaagcagatggcccagatcagagag
ctggttgagctcccgctgcgccacccccagctgttcaagtccattggtgtcaagcctccg
aagggcatcttgctgtatgggccacctgggaccggcaaaaccctcattgccagagctgtg
gccaacgagacaggcgccttcttcttcctgatcaatggcccggagattatgtcgaagctc
gccggagaaagcgagagcaacctcaggaaggcgtttgaagaggccgagaagaacgcgccg
gccatcatcttcatcgacgagattgactccatagccccaaagagagaaaagaccaacgga
gaggtggaaaggcgtatcgtttcgcagctgctcactctcatggatgggcttaagtcccgt
gcacacgttattgtcatgggtgctaccaaccgcccgaacagcatcgaccctgctctcaga
aggtttggaaggtttgatagagagatcgacattggagtccccgatgaggtcgggcggctc
gaggttctccggattcacactaagaacatgaagctggctgaagatgttgagctggagcat
gtttcaagagacacccatgggtacgtcggcgccgatctcgctgccctttgtaccgaggct
gctctccagtgcattcgcgagaagatggatatcatagacctcgaggatgacaccattgat
gcggagatactgaattccatggccgtcacaaatgaccatttcaagattgcactggggaca
agcaacccatctgctcttcgtgaaactatggtcgaagttccgaatgtctcttgggaagat
attggtggcctggagagtgtaaaaagggagctgcaggagaccgtccagtatccagtggag
catccagagaaattcgagaagtttggcatggctccctccaaaggtgttctgttctacggc
cctccgggctgcggcaagaccttgttggccaaggcgattgccaatgagtgccaggcaaac
ttcatcagcatcaaaggaccggagctgcttaccatgtggtttggcgagagcgaggccaat
gtgcgtgagatcttcgacaaggctagggggtcggcaccatgcgtcctcttctttgacgag
ctcgactcgattgccaccaagcgaggaagcagtgttggcgatgccggaggtgccgccgat
agggtgctgaatcagcttcttaccgagatggacggcatgaatgccaagaaaaccgtgttc
atcatcggcgccaccaacaggccagacatcatagaccctgccttgcttcggcctgggcgc
cttgatcagcttatctacattcctctgcctgacgttgaatccaggctccagatcttcagg
gcctgcctcaggaagtctcctgtggccaaggatgttgacttgaatgcgctcgccaaatac
acgcaggggttcagcggcgcagacatcacggagatctgtcagcgtgcgtgcaaatatgcc
atcagagagaacattgagaaggacatggaaaaggagaggcggcggaaggacaaccctgaa
gccatggaggaagacgaggtcgatgagatcagggctgctcacttggaggagagcatgagg
tatgcacgccggagtgtgagcgatgctgatattcgcaaataccaggcctttgctcagacg
ctgcagcagtcccgtggtttcggcaccgagttccgattccctgatcggccggtggggggc
gctacagccgcggccgatcctttcgcgtccgctgccacggcagctgaagaagatgatttg
tacagttaa
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integrated database retrieval system
