Hordeum vulgare subsp. vulgare (domesticated barley): 123399988
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Entry
123399988 CDS
T11213
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123399988
03036 Chromosome and associated proteins [BR:
hvg03036
]
123399988
Enzymes [BR:
hvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123399988
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
123399988
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
123399988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-GeneID:
123399988
NCBI-ProteinID:
XP_044950313
UniProt:
A0A8I6XQS7
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All DBs
Position
5H:494768250..494772473
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AA seq
696 aa
AA seq
DB search
MPSIAAVPEPMAVDDSASKKAKRKQLKAEAAAAEAAAAAAAASGKKEKKDKKDKKRKIKE
PASSDEEGQSSTSSESEPAPAAKKAKKEKKDKKAKAEEPANDDGELTASGEEEEPADPNA
LANFRISEPLKDKLKSKGINALFPIQATTFGLVLDGKDLVGRARTGQGKTLAFVLPILES
LVNGPHKATRRTDYGRPPSVLVLLPTRELANQVHADFEFYGGTFGLSTCCAYGGSPYRPQ
ENALRNGVDIVVGTPGRVKDLIQKNKLNLWCLKFRVLDEADEMLNMGFKDDVELILGKVE
DVTKVQTLLFSATLPDWVKKLSMSFLKADRKTVDLVGNEKMKASASVRHLALPCNKAARS
QIIPDIIKCYSHGGRTIIFTETKESASELSSLIPGSRALHGDIAQAQREVVIAGFRSGKF
LVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLFDPRYKFG
VSRIERESGVKFEHISAPQPTDVAQSAGNEAAEAISSVSDSVIPVFRQQAEELLSSSSMS
AVDLLAKALAKAVGYTDIKKRSLLSSMENHTTLHLQTGRSMYTPSFVISTLKRFMPEDRL
SSVHGITLTSDGTSAVFDVPSAEVQDYIQGAENAAGLTIDEVKQLPALQEREQSKGNFGG
SRFGRGGGGRRFGGGGGGRFGGGRGRGGGGGRFNRR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccttccatcgccgccgtccctgagcccatggccgtcgacgactccgcctccaagaag
gccaagcgcaagcagctcaaggccgaggccgccgccgccgaggcagccgccgccgccgcc
gccgcctccggcaagaaggagaagaaggacaagaaagacaagaagcggaagatcaaggag
ccggcctcctccgacgaggagggccagagcagcaccagctccgagtcggagccggcgccc
gccgccaagaaggccaagaaggagaagaaggacaagaaggccaaggccgaggagccggcc
aacgacgatggggagctcaccgccagcggcgaggaggaggagcccgccgaccccaacgcg
ctcgccaacttccggatttccgagccgctcaaggacaagctcaagtccaagggcatcaac
gcgctcttccccatccaggccaccaccttcggcctcgtcctcgacggcaaggaccttgtc
ggccgggcgcgcaccggacaggggaaaacgcttgcttttgttctacccatattggaatca
ttggttaatgggccacacaaggcaaccagaaggactgattacggcaggcctccgagcgtt
ttggttctgctgccaaccagagagctagccaatcaggtgcatgctgacttcgagttctat
ggtggaacatttgggctctctacatgctgtgcttatggaggttccccctatcgccctcaa
gagaatgcattgagaaacggggttgacattgttgttgggactcctggccgtgtcaaggat
cttattcaaaagaacaaactcaacttgtggtgcttgaaattccgtgtccttgatgaggct
gatgaaatgcttaacatggggtttaaggacgatgttgagcttattcttggcaaggttgaa
gatgttactaaagtacagacgcttctgttcagtgctactctacctgattgggtaaagaag
ctctcaatgagcttcctgaaagccgacaggaaaacagttgatcttgttggcaatgagaaa
atgaaagctagtgcatctgttaggcatcttgctcttccttgcaacaaggccgcaaggtca
cagattattccagacatcataaaatgctacagccatggaggacgtaccattattttcacc
gagacaaaagaatctgcatctgagctctctagtttgattcctggatcccgtgccctgcat
ggagatatcgcacaagctcaacgtgaagtcgtcattgctggatttaggagcgggaagttc
cttgttttggttgctacaaatgtggcagcaagaggccttgacattaatgatgtgcagctt
atcattcagtgtgaacctccacgtgatgttgaagcctacatacatcggtcaggtcggaca
gggagggctggcaatactggcattgcagtcatgctttttgatcccagatataaattcggt
gtgagcagaatagagagggagtctggggtgaagtttgaacatatatctgcaccgcagcct
actgatgtggcacaatctgctggcaatgaagcagcagaggccatttcaagtgtttctgac
agtgttattcctgtttttcggcaacaagcagaggaactgctaagctcctccagcatgtct
gcagtcgatctactagccaaagcactggcaaaggcagttggctacactgacataaagaag
agatctttgctttcatctatggagaaccatactacgttacaccttcaaactggcagatcg
atgtatacaccatcgttcgtcattagtacattgaaaaggttcatgccagaagataggctt
tcaagcgtacatggtataaccctcacttctgacgggacaagcgctgtatttgatgttcct
tcagcagaggttcaagattacattcaaggcgcggagaacgcagccgggttgacaattgat
gaagtgaagcaactgccagccttgcaagagagggagcagtccaagggtaactttggtggg
tcgaggtttggccgtggaggtggtggaaggagattcggcgggggcggaggcgggcgattt
ggtggtggaagaggcaggggaggcggtggtgggaggtttaacaggaggtga
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