Hordeum vulgare subsp. vulgare (domesticated barley): 123400118
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Entry
123400118 CDS
T11213
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123400118
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123400118
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123400118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_16
zf-ANAPC11
zf-RING_UBOX
Prok-RING_1
VPS18_RING_C
zf_RING_Vps8_fungal
zf-C3H2C3
SoxA-TsdA_cyt-c
zf-RING_Vps41
zinc_ribbon_16
PHD_NSD
Prok-RING_4
Serine_rich
PHD
zf_RING_Vps8
RINGv
Motif
Other DBs
NCBI-GeneID:
123400118
NCBI-ProteinID:
XP_044950464
UniProt:
F2D1F4
LinkDB
All DBs
Position
5H:502617559..502624255
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AA seq
346 aa
AA seq
DB search
MEGSKGSDGGGERPGADHNPSPDQPPPAAAPGREDDGAAAAAVAAAAAEDEDEARRPFTA
LSQVDADLALARVLQEQERAYMMLRMNGVGGGGGGDGSDYGSSEAGSYEYDEDAEVDYEE
ELENHLRVHHHDHPGGGEADGDDDLEAEADGQGEGEGDGEDQGDDEGSEESEYEEEGFDE
DDDVELDLDPAEYEDDEAYARALQDAEEREVAARLMALAGISDWRAVEHVEDHINDAQDS
WQEVDPDEYSYEELVALGDVVGTESRGLSADTLASLPSVTYKTKDMQDGNTEQCVICRVE
FEEGESLVALPCNHSYHPDCINQWLQINKVCPMCSAEVSTSANKQA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggagggttccaaggggagcgacggcggcggcgagaggcccggcgccgaccacaaccct
agcccggatcagcccccgccggccgccgctcccggaagggaggacgatggcgctgcggct
gccgctgtcgctgccgcggcggccgaggacgaggacgaggcgcggcgcccgttcaccgct
ctcagccaggtcgacgccgacctcgccctggcgcgtgtcctccaggagcaggagcgggcg
tatatgatgctccggatgaacggagtcggcggcggcggcggcggcgacggtagcgactat
gggagctcggaggccgggagctacgagtacgacgaggatgccgaggtggactacgaggag
gagctcgagaaccaccttcgcgtccatcaccacgaccacccgggcggcggcgaggctgac
ggggacgacgatctcgaggctgaggctgatggtcagggcgagggcgagggtgatggtgag
gatcaaggcgacgacgagggctctgaggagagcgagtacgaggaggaggggttcgatgag
gatgatgatgtcgagctagatctagaccctgcagagtatgaggacgacgaggcttatgcg
cgagcgcttcaggacgctgaggagcgtgaggttgccgcacggcttatggctcttgctggt
atcagcgattggcgggcggtggagcatgtcgaggatcacataaacgacgcacaggattca
tggcaagaggttgatccagatgagtactcttatgaggaattagttgcattgggtgatgta
gttggtacagaaagtagaggtctctctgctgatacacttgcttccctaccttcagtaact
tacaaaacaaaagatatgcaagatggcaacacagaacaatgtgtaatttgtcgtgtggag
tttgaggaaggtgaatctttggttgcacttccctgcaatcattcataccatcctgactgc
atcaatcagtggcttcaaataaataaggtatgccctatgtgcagtgcagaagtttctacc
tcagcaaacaagcaggcatga
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integrated database retrieval system
