Hordeum vulgare subsp. vulgare (domesticated barley): 123400136
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Entry
123400136 CDS
T11213
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123400136
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
123400136
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
123400136
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
123400136
NCBI-ProteinID:
XP_044950487
UniProt:
A0A8I6XS98
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Position
5H:complement(503209994..503219610)
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AA seq
624 aa
AA seq
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MVKIVTYNVNGLRPRVAQHGSLRRLLDSLDADIICFQETKLSRQDLSGDVIMAEGYEAFI
SCNRTSRGRGVYSGVATFCRVSSAFASQDVALPVAAEEGFSGLQGSAKDNKIIGDFVLEM
PMEEEDLGEITREELLRVDSEGRCIITDHGHFVLFNIYGPSIGEDDEERVRFKLLFYKVL
QRRWEFLLALGKRVFVVGDLNIAPSSIDRCDAPPGFEKQMFREWLRSMLREHGGPFFDAF
RSKHPEREGAYTCFNQAVGAEEFNYGSRIDHILVSGVCFHHCNSVEDHSIFHCHVEDCEI
MNRFRRGDPENNSKWKGGRSSKLEGSDHIPVYMVLNGIPEVPLHNTPSSAARYLPEIRGR
QQSIVSFLSKGKTYEVEDGPGLNMPRDRANESCCSDDLESKSISKEELSTGITEFSQGVN
IPSPMCKRRNLDHWLNEGSSGNSQNSNVTLLAAHGMKASFSGTKSMSNKRNKRNLPSQPT
IKSFFQRPETKPGDANISSLVSSVDTGPAMDESCCPKDDSLPENIQCTAAVDEDQDNSNM
PCSLSTDKCNVATLEWQRIQQRMKMTLPVCKGHCEPCIPRSVKKGSNIGRLFYVCARAQG
PSSNPEANCNHFQWASVKSKGKRQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatagtgacgtacaacgtgaatgggctgcgaccgcgggtggcgcagcacggc
tcgctccgccgcctcctcgactcgctcgacgctgacatcatctgcttccaggagaccaaa
ttgtccaggcaggacttgtctggggatgtcataatggctgagggatacgaggccttcatt
tcgtgcaatcgtacgtcgagagggcgcggagtgtactctggtgttgcaacgttttgccgg
gtgtcatcagcatttgccagtcaggatgttgctttgccagtcgcagctgaagaaggcttt
tctggattacagggctctgcaaaagacaataagattattggggattttgttcttgaaatg
cctatggaagaggaagatcttggcgaaataacaagagaggagctgctcagggtggacagt
gaggggcgatgcatcatcactgaccatggacattttgttcttttcaatatttacggccca
tctattggagaagatgatgaagaacgagtacgttttaagctactattttacaaagtattg
cagagacggtgggaatttctactggctctcggaaagagagttttcgttgttggagatttg
aatattgctcctagttcgatagataggtgtgatgccccacctggattcgagaagcaaatg
tttcgggagtggctgagatccatgttgagagaacatggaggtcccttttttgatgctttc
agatcaaaacaccctgaaagggagggagcttatacttgcttcaatcaagcagttggagct
gaagaattcaattacggttctagaatagatcacattctcgtttccggtgtctgttttcat
cactgcaattccgtggaagaccatagcattttccattgccatgtggaggattgtgagata
atgaatcgtttcagaagaggggatcctgaaaataactcgaagtggaaaggagggagaagt
agtaagctagaagggtccgatcatattccagtttatatggtactgaatggaatacctgaa
gttccactccataataccccatcatcagctgcaagatatctcccagaaatccgtggacgg
caacagagcatagtatctttcctcagtaaagggaaaacttatgaagttgaagatggccca
ggtttaaatatgcccagggatagagccaatgaaagctgctgtagtgatgacttggaaagc
aaaagtatatccaaggaagaattgtcaactggtataaccgagttttctcaaggtgttaac
attcctagtccgatgtgtaagcggaggaatcttgatcattggttaaatgaaggttcaagc
ggcaactcccaaaatagcaatgtaacattactggcagcacatggtatgaaagcctccttt
tctggcaccaagtccatgtcaaacaagaggaacaaacgtaacttaccctcacagcctaca
atcaagtcattctttcaaagaccagagacaaagccaggggatgccaatatcagtagccta
gttagttcagtagatacgggacctgctatggatgaatcatgttgtccaaaagatgatagt
ctgccagaaaatatccagtgtacagctgcggttgatgaagatcaggataactcaaatatg
ccatgttcactttcaactgataagtgtaatgttgcaaccttggaatggcagagaatacag
cagagaatgaagatgactctaccagtttgcaaaggacactgtgaaccttgcattccaagg
tctgtgaagaagggctccaatattggtcgcctgttctacgtctgtgcccgtgctcaggga
ccttcatcaaatccagaagcgaactgcaatcactttcaatgggcctctgtaaaatctaaa
gggaagcgtcaatga
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