Hordeum vulgare subsp. vulgare (domesticated barley): 123400994
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Entry
123400994 CDS
T11213
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123400994
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123400994
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
123400994
NCBI-ProteinID:
XP_044950646
UniProt:
F2D5H2
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Position
6H:431716784..431724795
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AA seq
582 aa
AA seq
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MASNSSAAAVAALFGIREGHQQEQMKPLLAQQQRQHVIAPPSALLTTGPDQAAAEAPPVK
KKRTMPDPDAEVIALSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKDPN
QVQRRRVYLCPEPTCVHHEPGRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKA
HSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPPGAGHLYGATGAANMALS
LSQVGSSLHDAHGQYHQASPDLLRFGGGGGGGMAARLDHLLSSSNAPSFRHLPPPQAPAF
HLGTAQEFVDGNGQHAFLQGKPFHGLMQLPDLQGNGSGGTSSSPPGLFNLGYIANSANSS
GTSSHGHASQGHMANDQISEGAGGGGGGGAGSENSGAGFFSAGGNFSGGDHQVAPSGMYN
EQSVMMPQMSATALLQKAAQMGSSTSTDGGAASVFGGFMGSSVPQGRAPMLDQGQMHLQS
LMNSLAGGGNGGGMYGGANGRGMIDPRLYDMDQHEVKFSQQGRGGVGAGGDVTRDFLGVG
GRGEMMRGMSVARGENHSGSDMSFLEAEMKSASSAFNGGRMQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaattcatcagcggcggccgtcgcggcgctctttgggattagggaagggcac
cagcaggagcagatgaagccactgctcgcccagcaacaacggcagcatgtcatcgcgccg
cccagcgcgttgttgacgacggggccagaccaggccgccgcggaggcgccaccggtgaag
aagaagagaaccatgccagaccctgacgcggaggtgatcgcgctgtcgcccaagacgctg
atggcgacgaaccggttcgtgtgcgaggtgtgcaacaaggggttccagcgggagcagaac
ctgcagctgcaccggcgcgggcacaacctgccgtggaagctgaagcagaaggacccgaac
caggtgcagcgccggcgggtgtacctgtgcccggagccgacgtgcgttcaccacgagccc
gggcgcgcgctgggcgacctcaccggcatcaagaagcacttctgccgcaagcacggcgag
aagaagtggaagtgcgaaaagtgctccaagcgctacgccgtgcagtccgactggaaggcg
cactccaagatctgcggcacccgcgagtaccgctgcgactgcggcaccctattctcacgg
agggacagcttcatcacccacagggccttctgcgacgccctcgcccaggagagcgcgcgg
ctgcctcccggggccggccacctctacggcgccaccggcgcggccaacatggcactcagc
ctctcgcaggtcggctcctccctacatgacgcgcacggccaataccaccaggcatccccg
gatctcctccgcttcggcggtggcggtggcggcggcatggctgcccgcctcgaccacctc
ctgtcgtcgtccaacgccccgtccttccgccatctgccacctccacaggcacctgcattc
cacctcggcacagcgcaggagttcgtcgacgggaatggacagcacgctttcttgcagggc
aaaccgttccacggcctgatgcagctcccggatctccaagggaacggctccggcggcacg
tcctcgtcgcctcctggtcttttcaacctcggctacatcgctaacagtgccaatagctcc
ggtacctccagccacggccacgcgagtcagggacacatggccaatgaccagatcagcgaa
ggtgctggcggtggcggaggcggaggtgcaggttctgagaattcaggcgcggggttcttc
agcgccggtgggaacttttccggtggagaccaccaggttgctccttctgggatgtacaac
gagcaatccgtgatgatgccgcagatgtcggcgacggcgctgctccagaaggcggcgcag
atgggctcgagcacgagcacggacggcggcgccgcgtccgtgttcggcggtttcatgggc
tcgtccgtcccgcagggccgcgcacccatgctcgaccagggacagatgcacctgcagagc
ctgatgaactcgctggccggcggcggcaatggtggcggaatgtatggcggcgccaacggc
cgcggcatgattgatccaaggctgtatgatatggatcagcacgaggtcaaatttagccag
cagggccgaggcggcgtcggcgccggcggggacgtgacgcgggactttcttggcgtgggt
ggcagaggggagatgatgagggggatgtcagtggcaagaggagagaaccacagcggcagc
gacatgagcttcttggaggcagagatgaagtcggcctcgtcggccttcaatggaggcagg
atgcagtga
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