Hordeum vulgare subsp. vulgare (domesticated barley): 123401078
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Entry
123401078 CDS
T11213
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123401078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123401078
Enzymes [BR:
hvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123401078
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
123401078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
123401078
NCBI-ProteinID:
XP_044950729
LinkDB
All DBs
Position
6H:101955622..101970333
Genome browser
AA seq
1393 aa
AA seq
DB search
MLRQEEKLRCTKEPFIEDDGTRRIKSMRFSMLSGKEIRQSAEAQVWNNRIYGPDMKPVPN
GLLDTRMGAANKQGNCGTCHGSYTECPGHFGYLKLALPVFNVGFFNNILDVVKCICKGCS
RVLLVEKDRREFLKKMRQPRAEPLVKLALMKKVRDKCKLSRCPWCGYINGVAKKGRMGLV
IVHDCSKTLDGSTEELRSALSHKKEKLAITSVHTLDPATVLSLFRRMTDEDCELLNLGDR
PEKLIITEIAVPPVPIRPSVFVGGGRMSNEDSITCILKNIVNTNSILKGTLQSGEPLVKC
FDCWQHLQLQVVEYVNSDAPCLVDSQHRGLIQRLKGKTGRFRGNLSGKRTEYTGRTVISP
DPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGTKLHL
KYCDRRIAARELKYGCIVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESV
CNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLI
TRKDSFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAFTKVYL
NLTVREKICTKKCSLTVEDKTSEAVHEAMCPNDGFVYFRNSELLSGQVGKKTLGNGNNEG
MFSVLIRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGESLNEKKGKTIGEGYQ
ECHELIAQYSKGALKPQPGCTRAQTLEARISGVLNKLRDTAGDHCMSTLHWRNSPLIMSQ
CGSKGSPINISQMVVCVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGL
TATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFVY
GDDGMDPVKMEGKGGSPLNMDQLFMKVMATCPQRGHETLSPDAISQMLNDKLSKQDTSSG
GCSDKFKELLTKFIGNRIKMLRSTRRALHLDEDHVGTKDSSIEECIAANISGISAKQLEV
FLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI
INAAKKISTPIITAELLSGQDESFGVKVKRCIEKVVLGEVAAAIKIVLKSSQPNLVVKLD
MQRIEAQGYVGISANSVQLSIINYSKLKLKSEHVRVIDEDKLRIYPSGTDRSKLQFELHN
LKSMLPKVIVKGIPTVERAVVNPVKGRDRNIERYNLLVEGTNLLAVLGAPGVDAMKTKSN
HIMEVNQTLGIEAARRSIIDEIQYTFESNNMIIDLRHMMLLADLMTYKGEVLGITRYGIA
KMKSSVLMLASFEKTSEHLFNASYAGREDQIDGVSECIIMGIPMRLGTGILQVRQRLESV
PELKYQTDPIMSS
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaggaggagaagctgcgctgcaccaaggagcccttcatcgaggatgacggc
acccgaaggataaagagcatgcggttcagcatgttgtccggcaaggagatacgccagtcc
gcggaggcgcaggtctggaacaatcggatctacgggcccgacatgaagccggtgcccaac
ggattgctcgacacgcggatgggagctgcaaacaagcaagggaattgtggtacctgccat
ggttcatacaccgagtgcccaggccatttcggttacctgaagcttgcgctaccggttttc
aatgttggcttcttcaacaatattctggatgtagtcaagtgtatctgcaagggctgtagc
agggttcttcttgtggagaaagatcgccgagaatttctgaagaagatgcgacaacctaga
gcagaaccactagtcaaactcgccctcatgaagaaagtgagggacaaatgcaagctatcc
cgttgcccctggtgtggatacataaatggcgtggctaagaagggcagaatgggcttggta
attgttcatgattgtagcaaaaccttggatggaagtacagaagaactacggtctgcgtta
tcacacaagaaggaaaaactagccattacttcagttcacacgttagaccctgcaactgtt
ctatctcttttcagaagaatgactgatgaggactgtgagttgctcaaccttggtgatagg
cctgagaaacttatcattacagagatcgcagtgccacctgtgcctatccgtccttccgtt
tttgttggtggtggtagaatgagcaatgaagatagtatcacttgcatattgaagaatatt
gttaatacaaattccatccttaaggggacccttcaaagtggtgaaccgctcgtgaagtgc
tttgattgctggcaacaccttcaacttcaagttgttgaatatgtaaacagtgatgccccc
tgtcttgttgactcacaacaccgtggccttattcaacgactcaaaggcaagacaggccgt
tttcgtgggaacttgtccggaaaacgtacggagtacactggaaggactgtcatatctcct
gacccaaatttgaggataacagaggtggctattcctattttgatggctcgagtcttgact
tatcctgaaagagtttcgtactataacatagagaagctgcgccaatgcatacgaaatggg
ccacacaaacatccaggggcaaatttcataatacaacctgatggaacgaagctgcactta
aagtactgtgatagaaggatcgctgctcgggaattgaaatatggctgtatagtcgaaaga
catttagaagatggtgacattgtcctcttcaacagacaaccgagcttgcatagaatgtca
attatgtcgcacagggcaaggataatgccctggagaacactaagatttaatgagtctgta
tgcaacccctataatgctgattttgatggagatgagatgaatttgcatgtcccacagaca
gaggaagctcgtactgaagcacttatgcttatgggggttcagaacaatttatgtacccct
aagaatggggaaatactggttgcttccacgcaggactttttgacgtcttcttttcttatc
acgagaaaagactctttctatgacaggtcttcctttactctcttatgttcatatcttgga
gatgcaatggaaaatattgatttgccaacaccagcattaattaagcctattgagctttgg
actggtaaacaactattcagtgtgttagtacgtcctaacgcatttacaaaggtctatctg
aatcttactgttagagagaaaatctgtacgaagaaatgcagtcttactgtcgaagataag
acatctgaagcagtacatgaagcaatgtgtccgaatgatggttttgtctacttccgaaac
agtgaacttttatctgggcaagtcggcaagaaaactctaggtaatgggaataatgagggc
atgttctctgttcttataagagattataattctcatgctgcagcaagctgtatgaatcgt
ctggcgaagtttagtgcaaggttcatagggaatcatggtttttcaattggtgtggatgac
gtccaaccaggagaaagtctaaatgagaaaaaggggaaaacaataggcgaaggatatcaa
gaatgccatgagcttattgctcaatattcaaaaggtgcactcaaaccacaaccaggatgc
accagagctcaaacattggaggctcggatatctggtgtactaaataaattaagagacaca
gctggagatcactgtatgagtacacttcactggaggaacagcccattgattatgtctcag
tgtggatctaaaggttctccaatcaatatcagtcagatggttgtatgtgttggccaacaa
tcagttggaggacgtcgtgccccaaatggttttatagatcgaacgcttcctcacttccct
ataaattcaaagacccccgcggcgaaaggttttgttgctaattcattctataccggtttg
actgctactgagtttttcttccatacaatgggtggaagagaaggtcttgttgacacagcg
gtcaaaacagcagaaactggatacatgtcccgtaggttaatgaagggtttggaagatctc
tcagttttctatgatcagacagtccgcaacgctagtggtggtatagttcaattcgtctat
ggagatgatggcatggatcctgtaaagatggaaggaaaaggtggcagtcccttgaatatg
gatcaattgtttatgaaagtcatggccacatgtcctcaaaggggacatgaaacattatct
cctgatgcaatctcacagatgttaaatgataagctctccaaacaagacacctcgtctgga
ggttgtagcgataaattcaaggaattgttaacaaaatttatagggaatcgtatcaaaatg
ctgagaagcacaaggcgagcgcttcacctagatgaagatcatgtggggacgaaggactcc
agcattgaagagtgcattgctgctaatatttctggcatatctgcaaaacaactggaggtt
tttcttgatacttgtttatctcgttatcactcaaaaataattgaagcaggagcatcaata
ggtgcaatcggggctcagagtattggggagcctgggacccaaatgacattgaaaaccttc
cattttgcaggagtagccagcatgaatgttactcttggagttccccgcatcaaggaaatc
atcaatgctgctaaaaagataagcacacctattatcactgcagaacttctgtctgggcag
gacgagtcatttggtgtaaaggtgaaacgttgtatcgagaaagtagtgctgggcgaggtg
gcagcagccataaagattgtcttgaaatcaagccagccaaatttggttgtgaaacttgat
atgcaacgaatagaagctcagggatacgtaggaatctctgctaactctgtgcagctatca
attataaattattcaaaactcaagttaaaatctgagcatgttcgtgtaattgatgaagac
aagttgagaatatatccatctggaacagatagatccaaactccagtttgagctgcacaat
ctcaaatccatgcttccaaaagtgattgtgaagggtattccaactgttgaaagagctgtt
gtcaaccccgtgaaaggacgtgacagaaacatcgaaagatataacttgttggttgaagga
acaaacctcttagcagtattgggtgctccaggagttgatgctatgaaaacaaaaagtaac
cacatcatggaagtgaaccaaacgcttggaatcgaagccgcaaggagatctatcatcgat
gagattcagtatacatttgagagcaacaacatgatcattgatctgagacatatgatgctt
ctggcagatctgatgacatacaagggggaagtcctgggcatcacgagatacggcattgca
aagatgaagagcagcgtgctgatgctggcctctttcgagaaaacttcggagcatctcttc
aacgcttcatacgctgggcgtgaggatcagatagatggagtcagtgagtgcattatcatg
ggcatacccatgcgacttggcactggcattctccaagttaggcaaaggcttgagagcgtg
cctgaacttaagtaccagaccgatccaattatgtcgtcataa
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integrated database retrieval system
