Hordeum vulgare subsp. vulgare (domesticated barley): 123401209
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Entry
123401209 CDS
T11213
Name
(RefSeq) U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
KO
K12846
U4/U6.U5 tri-snRNP-associated protein 3
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123401209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123401209
Spliceosome [BR:
hvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
123401209
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Gene cluster
GFIT
Motif
Pfam:
SNRNP27
Motif
Other DBs
NCBI-GeneID:
123401209
NCBI-ProteinID:
XP_044950879
UniProt:
F2CQT6
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Position
6H:535142483..535145834
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AA seq
209 aa
AA seq
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MSDRRRDKERPRERGGYDQPRERDHDGHRDAERHRDSHRDRDRDRDRDVDRHRDRDRGQD
KERDRDRDYRRARKRSRSRSPSPSADRDRSRRRRSHSHSHRSRSPDAGRHKRRREGSPVA
DPKEDRKPDLPSAPKAAEEAAPVGDGDVDAEEMEMMKMMGIPVGFDSTKGKYVPGADVSG
VRAVTKRQPRQYMNRRGGFNRPLPPEVNR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccgccgccgcgacaaggagaggccccgcgagcgcggcggctacgaccagccg
cgggagcgcgaccacgacggccaccgcgacgccgaacgccaccgcgacagccaccgggac
cgggaccgggaccgggaccgggacgtcgaccgccaccgcgaccgggaccgcggccaggac
aaggagcgggaccgggaccgggactaccgccgcgcccggaagcgctcccgctcccgctcc
ccctccccctcggccgacagggaccgctcccgccgccgccgctcccactcccactcccac
cgctcccgctcccccgacgccggccgccacaagcgccgccgcgaggggtcgcccgtcgcc
gacccgaaggaggacaggaagccggacctcccctccgcccccaaggccgccgaggaggcc
gccccggtgggcgacggggacgtggacgccgaggagatggagatgatgaagatgatgggg
atccccgtcgggttcgactccaccaagggcaagtatgtccccggcgccgacgtcagcggc
gtgcgcgccgtcaccaagcgccagccgcggcagtacatgaaccgcaggggcgggttcaac
cgccccctgccgcccgaggtcaaccgctga
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