KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123401254
Entry
123401254         CDS       T11213                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 2-like
  KO
K12829  splicing factor 3B subunit 2
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123401254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hvg03041]
    123401254
Spliceosome [BR:hvg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    123401254
 Complex B
    123401254
 Complex C
   U2 SnRNP specific factors
    123401254
SSDB
Motif
Pfam: DUF382 PSP
Other DBs
NCBI-GeneID: 123401254
NCBI-ProteinID: XP_044950939
LinkDB
Position
6H:558084163..558089649
AA seq 589 aa
MAADPSSDHANGAPAPAPAPAADKKKSRESDRRRRRRKQKKNKAPASDAAASDADAAADA
DEEKPDSKPPVEIEVEYVPEEPDLADGLLADFKSIFDKFTFKEPPAAEDGEKKDEAADAA
KKGSGSDSDDDEQETQQKKKEGGISNKKKKLEQRMKIAELKQICNRPDVVEVWDATASDP
KLLVYLKSYRNSTCPKALVSKEEILAGMLQLPGSKVLVGKRGIEKQPFQLPDFIAATGIE
KIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYYEG
KEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLINMQRYGPPPSYPSLKIPGLNAPIPP
GATFGYRPGEWGKPPVDEHGRPLYGDVFGILQLDEPNYDEEPVDRSKHWGDLEEEEEEEE
DDDEEEEEELMEDEDMEAGMQSVDTMSSTPTGVETPDVIDLRKQQRKESERPTDKQLYQV
LEQKEEKIAPGTLYGSSHTYVVGAQDKAGVKRVDLLKNQKSDKVDVTIHPEELEVMDDVL
AAKYEEAREEEKLRNQKEDFSDMVAENASKRKRKHEKDGKSSKKKDFKF
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggccgccgaccctagctccgaccacgccaacggggccccggccccggcccccgccccc
gccgccgacaagaagaagtcgcgcgagagcgaccgccgccgccgccgccggaagcagaag
aagaataaggcgcccgcgtccgacgctgctgcctcggacgccgacgcggccgcagatgcc
gacgaggagaagcccgactccaagcccccggtggagatcgaggtggagtacgtgccggag
gagccggacctcgccgacggcctcctcgccgacttcaagagcatcttcgacaagttcacc
ttcaaggagccccccgccgccgaggatggggagaagaaggacgaggccgccgatgcggcg
aagaaggggtcggggtctgactcggacgacgacgagcaggagacccagcagaagaagaag
gaagggggcatctccaacaagaagaaaaagctggagcaaaggatgaagattgcggagctg
aagcagatatgcaacaggcccgacgttgtcgaagtttgggatgcgactgcatcagacccc
aagttacttgtctatctgaagtcttacaggaacagtacctgtcccaaggcactggtctca
aaagaggaaattcttgcagggatgctgcaacttcctgggagcaaggtcttggtgggcaag
agaggtattgaaaaacaaccgttccaacttcctgacttcattgctgcgactggaatagaa
aaaataagacaggcatatatcgagaaagaggatagcaaaaagttgaagcagaagcagcgg
gagcgtatgcagccaaaaatgggcaagatggatatagattatcaggttttacatgacgcc
ttcttcaaatatcaaacaaaacccaaattgactagtcatggtgacctttactacgaaggg
aaagagtttgaggtcaagcttagggaaatgaaaccaggtatgctatcccgagaacttaaa
gaagctcttggtatgccagaaggtgcaccgcctccatggcttataaacatgcagagatat
ggtcctccaccctcctacccttcgctaaagattcctggtctgaatgccccaattcctcct
ggtgctacttttggttaccggcccggggaatggggaaagcctcctgtggatgagcatgga
cgccccctctacggagatgtttttggtatcctacagctggatgaacctaattatgatgag
gagcctgttgaccgcagcaagcattggggagacttggaggaggaagaggaagaggaggaa
gatgacgacgaggaagaggaagaggagctaatggaagatgaagacatggaagctggcatg
cagtctgtcgacaccatgtcaagcactcccactggcgtggaaacacctgatgtcattgat
ctccggaagcaacagaggaaagagtctgaaaggccaacagataagcagttataccaggtt
cttgagcagaaggaggagaaaatcgcaccaggaaccctctatggatcaagccatacgtat
gtggttggggcacaggataaagctggggttaaaagggttgatcttctcaagaatcaaaag
tctgacaaagtggacgtcaccatacatcccgaagagctcgaagttatggacgatgttctg
gcagccaagtacgaagaagcccgtgaggaggagaagctacggaaccagaaggaagatttc
agcgacatggtggcggagaacgcgagcaagaggaagaggaagcacgagaaggacgggaaa
tcttccaaaaagaaggacttcaagttctag

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