Hordeum vulgare subsp. vulgare (domesticated barley): 123401281
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Entry
123401281 CDS
T11213
Name
(RefSeq) two-component response regulator ORR24-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123401281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123401281
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
123401281
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
NOA36
KaiA_N
Motif
Other DBs
NCBI-GeneID:
123401281
NCBI-ProteinID:
XP_044950988
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Position
6H:112369605..112374512
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AA seq
623 aa
AA seq
DB search
MTVEGRVGGGDGGGKDKFPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRM
LRENKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDY
LLKPVRLEQLKTIWQHVIRRNTKNRGSDNDDASQKGPNAEGENGGANRNKRQSRRDRDEN
GDDGDDSDENSNDNGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEN
ITRENVASHLQKYRLYLKRMSMDASRQANLVAALGGRNPAYSNMNSMDVFRHYNNAYGRY
RPVPTSTHSQSNNLVARMNSPSAYGMHGLLSPQSQPLHLGHAQNNNLGTSLNDLGVNNGN
LIRTAHMSTMVTGTSGNTFANISNGAQLAPTNRAVQPLESSNRQHLGRINSSSTDSFSSF
TSDSPHFPDLGRSSNTWQTAVPSNIQQLGQNGSMSQASFHGNGPRMEPVSSYAPPSNQIT
SLGNEMQNQVAPLASNTLPMVFNQGAAPFTFGNSTNSREAHNSNLAFSNSGINTSLPNLR
IDNSIMPRQTLDGGNTGGVPSLQDGKIDQQAVGNQLNYSNNDLVGTSGLQRELSGGLDDI
VVDMFRPDNDTGGIFIDTDWGLV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggaggggagggtcggcgggggggacggcggcggcaaggacaagttcccggtg
ggcatgcgcgtgctcgccgtcgacgacgaccccacctgcctcaaggtcctcgagaacctc
ctgcgccgctgcgactaccatgttaccaccactgggcaggcagccaccgccctcaggatg
ctcagggagaacaaggaccagtttgacctcgtgatcagcgatgtccacatgccggacatg
gatggtttcaagctcctcgagcttgtcggtctggagatggacctcccagtcattatgttg
tctgcaaatggggagacacagacagtcatgaagggcataactcatggagcatgtgactac
ctgctaaagccggtgcgtcttgagcagctgaagacaatatggcaacatgtgattaggcgg
aataccaagaaccgtggtagtgacaacgatgatgccagtcagaaggggccgaatgctgaa
ggtgagaatggtggcgctaaccgcaacaagaggcagtcacggagggatagagatgagaat
ggagatgatggtgacgattctgatgagaacagtaatgacaacggcgactcgtcatcccag
aagaagccaagggttgtgtggtctgtggagctgcaccggaagtttgtagctgctgtcaac
cagcttggcattgacaaggctgttccaaagaagatattggacctcatgaacgtagagaac
atcaccagggagaatgttgctagtcatctgcagaagtaccggctgtatctgaaaaggatg
agtatggatgcaagcagacaggctaacctagttgctgcacttggaggaaggaatcctgct
tacagcaatatgaattcaatggatgtcttcaggcactacaacaacgcgtatggtagatac
cgaccagttccaaccagcacccattcccagtcaaataaccttgttgcaaggatgaactcc
ccttctgcatatggaatgcatgggttgctgtctccacagtcgcagccacttcaccttggc
catgcccagaataataatctgggcacttccctgaatgatttaggggtcaataatggtaac
ctgatcagaactgcacacatgtcaacgatggtgactggtacctctggtaacacttttgca
aacatatcaaatggtgcacaattggctcctacaaatagggcagttcagcctcttgaatca
agcaacaggcaacaccttggtcggataaattcgtcttcgacagactcatttagctcattc
actagcgattctccccactttccagatcttggaagaagtagtaacacctggcaaactgca
gttccatccaacattcagcaacttggtcagaacggcagcatgtcccaagcaagttttcat
gggaatggtccaaggatggaacctgtctcaagctatgcaccaccatcaaatcagattaca
tctctaggaaatgagatgcagaatcaagttgcgccactagctagcaatacccttccaatg
gtattcaatcagggtgcagcgccattcacctttggaaacagcacaaactcgagagaggca
cacaatagcaaccttgcgttcagcaattcaggcatcaacacttctttgccaaaccttcgc
attgacaattcgattatgccaaggcagactctggatggcgggaatacaggcggtgttccc
tctctgcaggatggcaagattgatcagcaagctgttggtaatcagctcaattacagcaac
aatgatctcgtggggacgagtgggctgcaaagggagctcagtggtggtttggatgacatt
gttgttgacatgttcaggccggataacgatactggtggcattttcatcgacacggactgg
gggctggtctag
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