Hordeum vulgare subsp. vulgare (domesticated barley): 123401308
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Entry
123401308 CDS
T11213
Name
(RefSeq) probable diaminopimelate decarboxylase, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00300
Lysine biosynthesis
hvg00470
D-Amino acid metabolism
hvg01100
Metabolic pathways
hvg01110
Biosynthesis of secondary metabolites
hvg01230
Biosynthesis of amino acids
Module
hvg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
123401308
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
123401308
Enzymes [BR:
hvg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
123401308
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
123401308
NCBI-ProteinID:
XP_044951017
UniProt:
A0A8I6XS45
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Position
6H:68690956..68696588
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AA seq
484 aa
AA seq
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MAAANLLSRSLAPSLTPNPASQPRRSRAASVSIRRRHGPAAPLRASLSTASPSTRVAMGE
APKHCFQRGADGHLYCEGVRVEDTMAAADRTPFYLYSKPQVVRNFTAYDKALQGLRSIVG
YAVKANNNLSVLQLLRGLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLEDLVLAAE
SGVFVNIDSEFDLENIVTAARVAGKQVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEK
LQWFLDSIKSYSNDIKLVGVHCHLGSTITKVDIFRDAANLMVNFVDEIRAQGFELEYLNI
GGGLGIDYHHTGAVLPTPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCFVNKVTGVKS
NGTKNFIVVDGSMAELIRPSLYGAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRE
LPTPDKGAGLVVHDAGAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYMKFFD
GLPA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccaacctcctctcccgctccctcgccccctcgctgacccccaaccccgcc
agccaaccgcgccgcagccgcgccgcatccgtctccatccggcgccgccacggacccgcg
gcccccctccgcgcctccctctccaccgcctccccgtccacgcgcgtggccatgggggag
gcgcccaagcactgcttccagcgcggcgccgacggccacctctactgcgagggggtgcgg
gtggaggacacgatggcggcggcagaccggaccccgttctatctctacagcaagccgcag
gtcgtccggaacttcaccgcctacgacaaggcgctccaggggctccgctcaatcgtcggg
tacgcggtgaaggccaacaacaacctcagcgtgctgcagctcctgcgggggctcggctgc
ggcgccgtcctcgtcagcggcaacgagctccgcctcgcgctgcgggcaggatttgacccc
accaggtgcatatttaatggaaatggaaagacattggaagatcttgttttagctgcagag
agtggagtatttgtaaatatagacagtgaatttgatttggagaatattgtcactgctgca
agagttgcaggaaagcaagtgcctgttttgctcagaattaatccagatgtggatccgcag
gttcatccatatgttgccactggaaacaaaacatccaaatttgggattcgcaatgaaaaa
ttgcaatggttcttagactcgattaagtcgtactcaaatgatatcaaactggtgggtgtt
cattgccatcttggatctaccattacaaaggtcgatatatttagagacgctgcaaatctt
atggtgaactttgttgatgaaattcgagcgcaaggttttgagttggagtacctgaatatc
ggaggtggcttggggatagactaccaccacacgggtgcagtcttgcctacacctatggat
cttatcaacactgtccgggaattggtcctctcacgggatcttactctcattatcgaacct
ggaagatccctgatcgccaatacttgctgcttcgttaacaaggtcaccggtgtaaaatct
aatggcacaaagaatttcattgttgttgatggcagcatggcggagctcattaggcctagt
ctatatggagcatatcagcatatagaactagtttccccctctccaggtgcagaagtagca
acctttgacattgttgggccagtctgtgaatctgcagatttccttggcaaagacagggag
cttccaacgcctgacaagggagctggtttggttgtccatgacgcaggagcctactgcatg
agcatggcttcgacctacaacctgaagatgagaccagccgagtattgggtagaggatgat
gggtccatcgttaagatcaggcatggcgaaacatttgatgactacatgaagttctttgat
ggtctccctgcctag
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