Hordeum vulgare subsp. vulgare (domesticated barley): 123401310
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Entry
123401310 CDS
T11213
Name
(RefSeq) two-component response regulator-like PRR1
KO
K12127
pseudo-response regulator 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123401310
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Gene cluster
GFIT
Motif
Pfam:
CCT
Response_reg
Jas_motif
KaiA_N
Motif
Other DBs
NCBI-GeneID:
123401310
NCBI-ProteinID:
XP_044951019
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Position
6H:368100828..368103754
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AA seq
522 aa
AA seq
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MVGAGEGGRAGGSGAGVGAGAGQPFVDRSKVRILLCDSDPDSSQDVLRLLCNCSYQVTCA
KSPRQVINVLNCEGAEIDIILAEVDLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSV
VVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLAEKNFFIDNLELVLSEPSDANT
NSTTLLSDETDDKPKGNRNHETNTSSQYEYESPATDPPKTDQLENLPSIAEDDDNASSPG
GMFSRPIKTNLRIAESSAFLAYVKSSTPANSSLDTELQRGANKLDIVDHQVNFSGSTDRI
DTNSSTNIQDEKAFEMPTQYPLVCFSSSNLQLEQRNEGQQDVSGNPPVYHYPFYYPGMVE
HSMALHSVQSFQGNINTAQAHTPPTMLHQYSVYHQSHGASTMPSYQYNPAGMNVHSSHLS
MQNVWSSVSSTPISEERHGHSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKLAETRPRVR
GQFVRQASNTSYTDIISTGDDISEYEDDDPSSRDVELVSSPE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgccggcgaggggggccgcgctggcggcagcggcgccggggtgggggcaggg
gcagggcagccgttcgttgaccggagcaaggtgaggatcctcctctgtgacagcgacccc
gacagctcacaggatgtgcttcgcctcctctgtaactgctcctaccaagtgacctgcgcc
aagtctccacggcaggtgatcaacgtgctcaactgcgagggcgctgagatagacatcatc
ctcgccgaggtcgacctgccagtctccaagtgcttcaagatgctcaagtacattggcagg
aacaaggagctgcgtcacatccccatcatcatgatgtccaatagagacgaggtttctgtt
gttgtcaagtgcttgcggctcggggcagccgagtacctggtcaagccgcttcgcatgaat
gagctcttgaatctgtggacccatgtgtggcgaaggagacggatgcttggtttggccgag
aaaaacttcttcattgacaatcttgagttggtgctatccgaacctagtgatgccaatacc
aatagcaccacactcctttcggatgagacagatgacaagccaaaaggaaatagaaatcat
gaaacaaatacctcgagtcaatatgaatatgagtctcctgctacggaccccccaaaaaca
gaccaattggaaaatttacctagcattgcggaagatgatgacaatgcatcatctccagga
ggaatgttttcacgcccaataaagactaatttgaggatagctgagtcatctgcatttcta
gcatatgttaaatcaagcactccagcaaacagctcattggatactgaactacagagaggg
gctaataagttagatattgtggatcaccaggttaatttctccggttcgactgacagaatc
gacactaatagcagtacaaatattcaggatgaaaaagcttttgagatgcccacgcagtat
cctttggtttgcttttcttcctctaacttgcaactggagcaaaggaatgagggtcaacaa
gatgtttcaggaaaccctcctgtatatcattacccattttattatccagggatggtagag
catagcatggcacttcattcagttcaaagtttccaaggaaacataaacactgctcaagct
catacaccaccaacaatgctccatcaatacagtgtttatcaccaatcccatggtgcgtct
acaatgccatcgtatcagtacaatcctgctggtatgaatgtgcattcaagtcacttgtca
atgcagaatgtgtggtcatcggtatcgagcacaccaatttccgaggaaagacatggtcac
tctggcaggagggctgcagcacttgcaaaattcaggcagaaaaggaaggaccgctgtttt
gacaagaaggtgaggtatgttaataggaagaaacttgctgaaacaaggccgagggtgcgg
ggtcagtttgttaggcaggcaagcaacacaagctacacagatataattagcactggtgat
gatatttctgaatacgaagacgatgatccatcctccagggacgttgagttggtttcttca
ccagagtag
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