Hordeum vulgare subsp. vulgare (domesticated barley): 123401341
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Entry
123401341 CDS
T11213
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvg03016
]
123401341
Enzymes [BR:
hvg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
123401341
Transfer RNA biogenesis [BR:
hvg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123401341
Prokaryotic type
123401341
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GFIT
Motif
Pfam:
PseudoU_synth_1
Ferrochelatase
Motif
Other DBs
NCBI-GeneID:
123401341
NCBI-ProteinID:
XP_044951059
UniProt:
F2EAU5
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Position
6H:426201379..426203626
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AA seq
572 aa
AA seq
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MAAASPPPSPPHPKRPKMSSSSDPEPEPTSLSAVGADPGQPRRRYKRRKVAIILAYCGAG
YQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPARYEWARAARTDKGVSAAAQVVSGR
FYVDPPGFIDRLNAKLAPQIRAFGYVRVTNSFSAKKFCDRRRYVYLLPVLALDPSAHPDR
EAVKASAGSENQLAKCVECSERGRKVPDIMGREGKLPDSEENKVLDTSGEETVAAHGELR
SNGEAKPFPTSSVTGTCDGETRLGCDVMIDIASSDNGTEAQNSELESIGSGKCDIEPAEA
VPTSASETIFSDSTVGSVDVVASVVAEKGNNFEPADSEKERMQATNIQKENGEGSPLLKN
TFAYTDEVKEKFNRILKHYVGTRNFHNFTTRTKAEDPAAKRYIISFTANSVVSLDGIDFV
RCEVVGQSFMLHQIRKMVGLAVAVMRNCAPESIYDVAFRKDIRLNVPTAPEVGLHLDECM
FASYNSKWMDTHEAVSIEPYAEEAEEFKIKYIFPHIAAMEHKEGAVALWLHSLNSRNYPD
FRYMETAGSEAKVRAEVENMEEAQMPSTNISE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcgccgccgccctccccgccccatccaaagcgccccaagatgtcctcc
tcctccgaccccgagccggagcccacctcgctgtctgctgtcggcgccgatcccgggcag
cctcgccggcgctacaagcgccgcaaggtggccatcatcctggcatactgcggcgcggga
tatcagggtatgcagaagaatccgggcgcgcgcaccatcgagggcgatctcgaggaggcg
ctctaccaggcgggcgccgtccccgaggccgaccgtgccgcgcccgcccgatacgagtgg
gcacgcgcagcgcgcaccgataagggcgtgagcgccgccgcgcaagttgtctccggacgc
ttctacgtcgacccgccgggattcattgaccgcctgaatgcgaagctcgcgccacagatc
cgggcctttggctacgtgcgcgtcaccaactccttcagcgctaagaagttctgcgaccgc
cggaggtatgtgtacctgctccccgtcttggcgctcgaccccagcgcacaccccgaccgc
gaagctgtcaaggcaagcgcggggagtgagaaccaacttgcgaagtgcgtggagtgctcc
gagagggggaggaaagtgccagatattatgggccgggaggggaagttgcctgactctgag
gagaacaaggttcttgatacatccggagaggaaactgtggctgctcatggagaactacga
tcaaatggggaagcaaaaccttttccaacaagctctgttactgggacttgcgatggtgag
actaggctgggatgtgatgtaatgattgatatagcgagctctgataatggaacagaagct
caaaattctgaactggaatcaattgggtcaggaaaatgtgatattgaacctgctgaagct
gtaccaaccagcgccagtgagaccatcttttctgattcaactgtaggttcagtcgatgtt
gttgcttcagttgtagctgagaaggggaataattttgagcctgcagatagtgaaaaggag
agaatgcaagctacaaatattcagaaggaaaatggggaaggaagtccccttctgaaaaac
acatttgcttacactgatgaagttaaagagaaattcaataggatcctcaagcattatgtt
ggaacccgcaatttccacaacttcaccacaagaaccaaggctgaggatcctgcagccaag
aggtacatcatttccttcactgccaatagtgtcgttagcctggatgggattgattttgtc
agatgcgaggttgtcgggcagagtttcatgcttcatcagatccgtaagatggttggcctt
gccgtcgcagtgatgaggaactgtgcacctgagtcaatctatgatgttgccttccgcaag
gatatcagacttaatgtgcctaccgcacctgaggttggactgcacctggatgaatgcatg
tttgcctcgtataactcaaaatggatggatacacatgaggcagtttcaattgaaccctat
gccgaggaggctgaagagttcaagatcaagtacatctttcctcatattgctgcaatggaa
cacaaggagggagctgtagcactctggttgcactcattgaacagcaggaactatccagat
ttccgctacatggagactgctggatctgaggcaaaggttagggctgaagttgagaatatg
gaagaagcgcaaatgccaagcactaatataagcgagtaa
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