Hordeum vulgare subsp. vulgare (domesticated barley): 123401579
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Entry
123401579 CDS
T11213
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03420
Nucleotide excision repair
hvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123401579
09124 Replication and repair
03420 Nucleotide excision repair
123401579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
hvg03051
]
123401579
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123401579
Proteasome [BR:
hvg03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
123401579
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
123401579
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
CUE
TECR_N
FtsX_ECD
Ubiquitin_4
UBA_RAD5A
MCM_N
Ubiquitin_2
Ddi2_HDD
KIP1
A_thal_3526
Motif
Other DBs
NCBI-GeneID:
123401579
NCBI-ProteinID:
XP_044951342
UniProt:
A0A8I6YRG8
F2EBG8
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All DBs
Position
6H:complement(119102708..119110327)
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AA seq
367 aa
AA seq
DB search
MKLTVKTLKGTHFEIRVQHNDTIMAVKKNIEEIQGKDSYPWGQQLLIHNGKVLKDESTLD
ENQVGEAGFLVVMLSKSKASASSGGSSAQPSSTPVTSQAPPVAQPQAPQPQVPSTTTSQP
ERPPAETPLSTVDIAASDLLSGSNLDTMINQIMEMGGGSWDRDKVQRALRAAYNNPERAI
DYLYSGIPVTAEVAVPVVGQGANTTAAAPGETGLSGIPNTAPLDLFPQGASHAGGAAGGG
SLDFLRNNQQFQALREMVHTNPQILQPMLQELSKQNPQLLRLIQENNDEFLQLLNETFEG
GDGDFLDQADQDEMPHAISVTPEEQEAIGRLEAMGFERARVIEAFFACDRNEQLAANYLL
EHAGDEE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggtgaagactctcaagggcacccacttcgagatccgggtccagcacaat
gacaccattatggctgtcaagaagaacattgaagagattcaaggaaaggatagttatcca
tggggtcaacaactactgattcacaatggcaaggttttgaaggatgaaagcacattggat
gagaatcaagttggcgaagctggatttctagttgtcatgcttagtaagagtaaagcttct
gcttccagtggaggttcatctgcccagccttcaagcactcctgttaccagtcaagcgcct
ccagttgctcaaccacaagctcctcagccccaagtcccatcaactacgacttctcagcct
gaaagaccacctgcagagacccctttgagcacagttgatattgcagcatcggatttactg
tcaggaagcaatctggacacaatgattaaccagataatggagatggggggtggcagttgg
gatagagataaggtccaaagagctctccgtgcagcctataacaatccagaacgtgccatt
gactatctgtactctggtattcccgtgacagccgaagttgctgttccggtggttggtcaa
ggggcaaacaccactgctgcagctcctggagaaactggcctctctggaatcccaaacaca
gcaccgttggatcttttcccgcagggggcttcccatgctggaggtgctgctggtggtgga
tcacttgattttcttcgaaataaccaacagtttcaagcacttcgggaaatggtccataca
aatccacaaattttacagcctatgctccaggaattgagcaagcagaatcctcaacttcta
aggttgattcaggagaacaatgatgagttccttcagttactaaatgagacatttgaaggc
ggcgatggggacttcttagaccaggctgaccaggatgaaatgcctcatgctatcagtgtg
acaccagaagagcaagaggcaattggaaggttggaagccatggggtttgagagagcacgt
gtcatcgaagcattcttcgcctgtgacaggaatgagcaactcgctgcaaactatcttctt
gagcatgctggtgacgaagaatag
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