Hordeum vulgare subsp. vulgare (domesticated barley): 123401630
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Entry
123401630 CDS
T11213
Name
(RefSeq) protein argonaute 1A-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123401630
03036 Chromosome and associated proteins [BR:
hvg03036
]
123401630
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123401630
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123401630
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
123401630
microRNA pathway
RISC loading complex
123401630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
123401630
NCBI-ProteinID:
XP_044951401
UniProt:
A0A8I7BC68
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Position
6H:complement(432091624..432105034)
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AA seq
1086 aa
AA seq
DB search
MASRTDNNVYSPHDQALPMMKNKRYTPPSARGSTETHDAPRTPGQDPSQRVERAQQHEGG
GRLHANTQYSQQGGRGGGQHLRFGGHFQDPASHQPFGGPVKYQAHGHYGHGTPRQRGTPQ
PYHDGRRNGSHGRGVPDTPSITLPELHQAPQVQNQVPVLTPSPPETASSSPHVEMNTGQI
QLQFQQLDILGQSSSRQGIRSAPSSTKSIRFPMRPGKGTFGTRCIVKANHFSAELPDKDL
HQYDVSITPDIPSRGVNRAVMGQLVTLYRHSLLGGRLPAYDGRKSLYTAGPLPFTSRTFN
IVLQDEDDKLGGTQVAQRREKHFTVVIKFAARADLHHLAMFLAGKQPDAPQEAIQVLDIV
LRELPTARYSPVARSFYSPNLGRRQQLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFI
EPLPVIDFVAQLLNRNVSVRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRIFGLTSQA
TRELTFPIDDHGTVKTVLHYFQETYGFNIQHTTLPCLQVGNQQKPNYLPMEVCKIVEGQR
YSKRLNEKQITALLKVTCQRPQQRELDILQTVNHNAYHADPYAQEFGIRIDERLASVEAR
ILPPPRLKYHDSGREKDVLPRIGQWNMMHKKMVNGGRVKDWICINFSRNVQDSAAGNFCH
ELAGMCQTSGMDFSVDPLLPPLSARPEHVERALKARYRDAMNVLKPLGRELDLLVAILPD
NNGSLYGNLKRICETDLGLVSQCCLTKHIFKMNPQYLANVALKINVKVGGRNTVLVDALS
RRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQTRRQELI
QDLFKVWQDPQRGTVTGGMVRELLISFKRSTGQKPQRIIFYRDGVSEGQFYQVLLYELDA
IRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRSVDRKSGNILPGTVVDSKICHP
TEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPA
YYAHLAAFRARFYMEPDTSDGGSVASGATTGRGPTGARGGSRAAGNVAVKPLPDLKENVK
RVMFYC
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccggacggacaacaacgtgtactccccacacgatcaagctttacctatgatg
aaaaataaaaggtataccccccctagcgcccgtggaagtactgaaactcacgatgctcca
agaacccctggacaggatccatcacagcgggttgagagagctcaacagcatgaaggtggc
ggtcggctacatgccaatactcaatattctcaacaaggtggtcgtggtggtggacaacac
ctgagatttggtggacattttcaggatccagcatcacatcaaccatttggtggtcctgtt
aagtatcaagcacatgggcattatggccatgggaccccacgccaaagaggaacaccacaa
ccataccatgacgggcgtaggaacgggagtcatggacgcggagttcctgatactccatca
ataacacttcccgaactgcaccaagctccacaagtccagaaccaagttccggtgcttaca
ccttcaccacccgaaactgcctcatcctcaccacatgttgagatgaacactggacaaatc
cagttacagtttcagcaacttgatatcctgggtcaaagttcctctagacagggtatccga
tcagcaccatcatcaactaaatcaataagatttccaatgcggcctggcaagggtacattc
ggcactaggtgcatcgtgaaagcaaaccatttctctgctgaattgcctgataaagatctt
caccagtatgatgtgtctataacccccgacattccttcccgtggtgtcaatcgtgctgtc
atgggacaacttgtaacactctacagacattctcttttgggtggccgtcttcctgcctat
gatggaaggaagagcctatatactgccggaccgttgccatttacttctaggacctttaat
attgttcttcaggatgaggatgataaacttggtggtacgcaagttgcacaaaggcgtgaa
aaacattttacggttgtcatcaaatttgccgcgcgtgccgatctccatcatttagctatg
tttctagctgggaagcagccagatgctcctcaagaagctattcaagtgcttgacattgtt
ctacgtgaattacctactgcaaggtattccccagttgccagatcattttattcacctaac
ttagggaggcgccaacaacttggtgatggcttggaaagttggcgtggtttttaccagagt
atacggcccacacagatgggactttcattgaatattgatatgtcatctacagcgttcatt
gagcctcttcccgtgattgattttgttgcacaactcttgaacagaaacgtgtcagtcaga
ccattatcagatgctgaccgtgtgaagatcaagaaggccctgcgaggtgtaaaagttgaa
gtcacacatagaggcaatatgcgcagaaagtatcgtatatttggtcttacctcacaagca
acaagagaattaactttccctatagatgaccatggtactgttaagacagtattgcactat
ttccaggagacatatggttttaacattcagcataccactttaccttgcttgcaagtcggc
aaccaacagaaaccgaattatcttccgatggaggtatgtaaaattgtcgagggacagcgt
tactcgaaacgattgaatgagaaacagataactgctcttcttaaagtgacctgccagcgt
ccccagcagcgggagctggacattttgcagacggtgaatcacaatgcataccatgcggat
ccatatgcacaggagtttggtataaggattgatgagcgtcttgcatcagttgaagctcga
attctacctccccctagacttaagtaccatgatagtggcagagagaaggatgtcttgcca
agaattggccaatggaatatgatgcataagaaaatggtcaatggtgggagagtcaaggac
tggatatgcatcaacttttctcggaatgtccaagatagtgccgcggggaatttctgtcat
gaactggctggcatgtgccaaacatctgggatggacttctcagtggatcctctgcttcct
cctttatctgcgagacctgaacatgtagaaagagcactcaaggcacgctatcgagatgcc
atgaatgttctgaaaccactgggcagggagcttgacctgcttgttgcaattttgcctgac
aataatggttctctttatggtaatctcaaaagaatatgtgagacagatcttggattggtc
tctcaatgctgtctgacgaaacatatttttaagatgaacccgcagtatcttgcaaatgtc
gcccttaaaatcaatgttaaggtgggaggaagaaatactgtacttgtagatgctttgtca
aggagaattccccttgttagtgacagaccgaccattatatttggtgctgatgttacccat
cctcatcctggagaagattctagcccttccatcgcagctgttgttgcttctcaagattgg
cccgaggtcaccaagtatgctggattggtgagtgcacaaactcgtcgccaggagttgata
caagatctttttaaagtgtggcaagatcctcagagagggactgtaactggtggaatggtt
agagaacttctcatttcctttaagagatcaactggtcaaaaaccccagaggatcatattc
tacagggatggtgttagcgaaggacagttctatcaggttctgttgtatgagcttgatgcg
attagaaaggcctgcgcatccttggagcccaattatcagccacccgttacatttgtggtg
gtccagaaacgccatcatacacggctatttgccaacaaccacaacgatcagcgaagtgtt
gatagaaaaagtggaaacatactgcctggtaccgtcgttgattcaaagatatgccatcct
actgagttcgatttctacctttgtagccatgctggtattcagggaacaagccgccctgcg
cattaccatgtcctttgggatgagaacaattttaccgcggatggtttgcagactctcacg
aacaacctgtgctacacctacgcaaggtgcacccgttctgtatcgattgtgcctccggca
tactatgctcacctcgcggcttttcgagctcggttctacatggaaccggatacctccgac
ggtggctcggtcgcgagtggtgccacgacaggccgtggccctactggcgcacgcggcggc
agtagagctgcagggaatgttgctgttaagcctctgcctgacctcaaggaaaacgtgaaa
cgtgtcatgttttactgctga
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