Hordeum vulgare subsp. vulgare (domesticated barley): 123401906
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Entry
123401906 CDS
T11213
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123401906
Enzymes [BR:
hvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123401906
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
90S particles
Helicases
123401906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
ATPase
nSTAND3
PhoH
AAA_19
AAA_23
Motif
Other DBs
NCBI-GeneID:
123401906
NCBI-ProteinID:
XP_044951700
LinkDB
All DBs
Position
6H:496242008..496256015
Genome browser
AA seq
1274 aa
AA seq
DB search
MDEEEDSNALILPCKRKNKSQGKGKDGKKNKTKEDAKMSKTQLKKLQKLEEDKQKKALQA
QSIETLQKHRIADDAYSLLHTSGSIGQAVTTKEKRRRAMQLSKAGLDVPEELSLFKKNTD
QKEVAVPEKSEAAQETFPVKFVEAAKPYHPGSEPKNHESDAVKPNMGIGLSILKQKTEEV
NDDADILTHQSILEQKTEEINDDDDISVHQTVRSSVPSCSDEETDLQDKEPQQGEAAVQE
CFNPPIVVHVSRPHEVEKARRDLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQFL
YEAGFGTSNRADRKGMIGITQPRRVAVLATSKRVSYELGLKLGKEVGFQVRHDKKVGNKC
SIKFMTDGILLREVQSDFLLKQYSVIILDEAHERSLNTDILIGMLSRVIKARKFVYADQQ
KQIRSGMKIDPADMVSQLKVVLMSATLQLKDFISNRRLFDVIPPAVEVPTRQFPVTVHFA
KRTHDDYLAQAYKKVLSIHKSLPPGGILVFVTGQREVDYLCKKLQRASRRQIGKKPEMVG
DEYGSRPEIDEKEIFEAYDIDRTEPGHQDGIFSSYGEDEMDDELNVSSSDAETESEMDTD
SDEEDSVAHETTEEDGPVLSFLKGAESSSVLKASFKAISGQQETAEEASNATISEKPTSA
SRARLRVLPLYAMLPASQQLRVFHDIPEGERLVVVATNVAETSLTIPGITYVVDTGKEKV
KNYDHATGMASYEVQWISKASASQRAGRAGRTGPGHCYRLYSGAAYSKDDLFPEFTEPEI
KKMPVDGIVLMLKSMNIDKVENFPFPTPPNKESLVEAQRCLKILEAVDNQEKLTSMGKAM
AQYPMSPRHSRLLLTIIKMLKSQEGCARSNLILGYATAAASALSYSNPFQVQGNTDRETN
EDGPDPEHKDRHERKSQKKLKAMVREARKDFSIPSSDALTISHALRSFECSRNRVEFCRD
YSLHLKTMEEMSKLRMQLLRLIFNHSKFCDEFAWNFGGSQDVEQAWGSETNKKPTLNEEE
ILGQGICAGWADRVAKKINTFSGLSKEDRKVRAARYQSCALNDIIYLNRSSSVAQIPPDY
VVYSELLNTKRSYMYGVTSVKSGWLLKYASSLCTFSAPLEDPKPYYEPQNDQVYCYVSPI
FSRHNWQLPLHSLPIKDSTCRVQIFAWALLKGDVLPCLRVVQKFLALSPSVVLGPASQRR
VGDLLSRMSKKTIYSRAALRDAWNTDPDFLYPEIQAWIQDKYQSQLGAIWEQMHQEVRLE
GRELFPKRFKKVKA
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggaggatagcaacgcgctgatcttgccctgcaagaggaagaacaaatcg
caggggaaaggcaaggatggcaagaagaacaagaccaaggaagacgctaagatgagcaag
actcagctgaaaaagctgcagaaattggaggaggacaaacaaaagaaggcgctgcaagct
caaagcatcgagactttgcagaagcacaggatcgccgatgatgcatattccctgctgcac
acttcggggtctattggtcaagctgtcactacgaaagaaaaacgtaggcgtgccatgcag
ttatcaaaggctggtttggatgtccctgaagaactttcgctatttaagaaaaacactgat
cagaaagaagttgcagttcctgaaaaaagtgaagctgcgcaggaaactttccccgtgaag
tttgttgaggccgcgaaaccttatcatcctggtagtgaacctaagaaccatgagagtgat
gcagtgaagcctaacatgggtatcggccttagcattctgaaacagaaaactgaagaagtt
aatgatgatgctgacattttgacgcaccagagcattctggaacaaaaaactgaagagatt
aatgatgatgatgacatttcggtacatcagacagttcgttcatctgtgccaagttgctct
gatgaagagactgatttgcaggataaagagccacaacaaggtgaagccgctgtacaggag
tgcttcaatcctcccattgttgtgcatgtgtcaagaccacatgaggttgagaaggcgaga
agggatctcccaataataatgatggagcaggaaataatggaagctatctatgaaaattca
gtggtaattctgtgcggagaaacaggctgtggtaaaactactcaggtccctcagttctta
tatgaagccggctttggcacaagcaatcgagctgatagaaaagggatgattggtatcacc
cagccacggcgtgttgctgttcttgccacatccaagagggtatcttatgagttaggactt
aagctaggaaaggaggttggttttcaagttagacatgacaagaaggtgggaaataaatgc
tccatcaagttcatgacagatggcattttgctacgagaggtccagagtgactttctgttg
aagcagtattcagtgatcatcttggatgaggcacatgaaaggagtttgaacacagatata
cttattgggatgctttctagagttataaaggcacgcaagtttgtgtatgcagaccaacag
aaacaaatacgctctgggatgaagattgatccagcagatatggttagtcagttgaaagtg
gtgctgatgagtgctaccttgcaattaaaggactttatttcaaacagaagattgtttgat
gtgattccaccagctgtagaggtgcctacacgacaatttccagtaacagttcacttcgca
aagagaacacatgatgattatttagcgcaagcttataagaaagttttgtcgatccacaag
agtctaccaccaggtggaatccttgtatttgttactggacaacgagaagtggattatcta
tgtaagaaattgcaaagagcatccaggcggcaaattggtaagaaacctgaaatggttgga
gatgagtatggttcaagaccagaaatagacgagaaggaaatttttgaagcatatgatatt
gatagaactgaacctgggcatcaagacggcatattttcctcatatggtgaagatgaaatg
gatgatgagctaaatgtctcttcttctgatgctgaaacagagagtgagatggacactgac
agtgatgaggaggattctgttgcacatgaaacgactgaagaagatggaccagtgttatca
tttttaaaaggtgctgagagttcatctgtactgaaggcatcctttaaagctatatcagga
caacaagaaactgctgaggaagcaagcaatgctacaatttcagaaaagcctacatctgct
tcgcgtgctaggctccgtgttttaccactttatgcaatgctaccagcttcgcagcagctt
agagtattccatgatattcccgaaggggaaagattagttgttgtggcaactaatgttgca
gaaacatctttaacgattcctggcataacatatgtggtcgatactggaaaagaaaaggtt
aagaactatgaccatgccacggggatggcaagttatgaagtacagtggataagcaaggca
tcagcatcccaacgtgctgggagagctggaagaactgggcctgggcattgttaccgtctc
tactcaggtgcagcatacagtaaagatgatttatttcctgaattcactgagccagagatc
aagaaaatgccagttgatggcattgtgcttatgctcaagtctatgaatattgataaggtt
gaaaactttcctttccctacgcctcctaacaaggaaagtttggttgaagctcagcgttgc
ttgaagatattggaagcagttgacaaccaagaaaaacttacgtcaatgggaaaggctatg
gcgcaatacccaatgagcccacgacattctcgtcttcttctgacaataattaaaatgttg
aagagtcaggaaggatgtgctagatctaacctcatattgggatatgcaactgctgctgca
tcagctttaagttatagcaatccttttcaagttcagggcaacactgatagagaaacaaat
gaagatggccctgatccagaacataaggatcggcatgaaaggaagagtcagaagaagctc
aaggccatggttcgagaagcacggaaagatttttccatccctagcagtgatgctttaacc
atttcccatgctttacggtcatttgagtgttctaggaaccgagtggagttctgcagagac
tactcgcttcacctgaaaacaatggaagagatgtcgaaattgagaatgcagcttcttcga
ttaatatttaaccatagcaaattttgtgatgaatttgcttggaattttggagggtctcaa
gatgttgaacaggcctggggtagtgaaaccaacaaaaagccaacactaaatgaggaggaa
attctggggcaaggaatatgtgctgggtgggctgatagggttgcaaagaagatcaacact
ttctctggattgtccaaagaggatcgaaaggttcgagctgcacgttatcaatcttgcgct
ctcaatgatataatatatctaaaccgatcatcttctgttgcccaaattccaccagactat
gtagtttactccgaactactaaatacaaagagatcatacatgtatggtgtgaccagtgta
aagtcaggatggcttttgaaatatgctagttctctctgcaccttctcagcaccgctggag
gatccaaagccctactatgagcctcagaatgaccaggtctactgttatgtcagtcccatc
ttttctcgacataattggcagcttccactgcacagtttacccatcaaagattccacctgt
cgggtgcagatatttgcatgggctttgcttaaaggggatgtcttgccatgtctaagggtg
gttcaaaagttcctggctctgtcaccatctgttgtcctggggcctgccagccaaagaaga
gttggagatcttcttagcaggatgagtaaaaagacgatatatagccgggcagcattaaga
gatgcatggaatactgacccagattttctttatcccgagattcaggcgtggatccaggat
aaatatcagagccagcttggagcaatatgggaacaaatgcaccaagaagttcgcctcgag
gggcgtgaacttttcccgaagaggttcaagaaagttaaagcatga
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integrated database retrieval system
