Hordeum vulgare subsp. vulgare (domesticated barley): 123401941
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Entry
123401941 CDS
T11213
Name
(RefSeq) LOW QUALITY PROTEIN: threonine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123401941
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hvg01007
]
123401941
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvg03016
]
123401941
Enzymes [BR:
hvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
123401941
Amino acid related enzymes [BR:
hvg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
123401941
Transfer RNA biogenesis [BR:
hvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123401941
Prokaryotic type
123401941
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_GDI
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
123401941
NCBI-ProteinID:
XP_044951742
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Position
6H:478214578..478222430
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AA seq
933 aa
AA seq
DB search
MATLSAPLLRSHHRHLPVTSSPRRCSTAAAFPRGFAPLEPLSSRRPSRTAARSASTSAAA
PEAAEATGHAAQAETAGEEEVEARVVLPTNESSENLLRIRHTCAHVMAMAVQKLFPNSKV
TIGPWIDNGFYYDFDMEPLTDKDLKKIKKEMDRIIRRNLPLVREEVSREEAQKRIQALNE
PYKLEILERIKEEPITIYHIGEEWWDLCAGPHVESTGKIQRKAVELESVAGAYWRGDENN
QMLQRIYGTAWESEDQLKAYIHFKEEAKRRDHRRLGQDLDLFSIQEDAGGGLVFWHPKGA
IIRHILEDSWKQTHLQRGYDLLYTPHVAKADLWKISGHIDFYKENMYNQMDVEDEPYQLR
PMNCPYHILVYKRKLQSYRDLPIRVAELGTVYRYELSGALHGLFRVRGFTQDDAHIFCLE
DQIKDEIRGVLDLTEEILGQFGFRNYEVNLSTRPEKSVGSDDIWEKATIALKDALDDKGW
GYTIDEGGGAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDITYVDSHTEKKRPIMI
HRAILGSLERFFGILIENYAGDFPLWLAPTQARILPVTNNELQYCNEVASELKSRGIRAE
VCHGERLPKLIRNAETQKVPLMAVVGPKEVEARTLTIRRGPDDPIDWGVTRCGWDGVVGI
YDWSVMDGPNFTGQVDNTWDKNLQIGAHWDRLVIFLGGRKTERRRSPPEEAKECAAVAEH
GSGNGNGGGDAAPHCGKGVEEEDEEDGEKVPEHIDLGPILSIKDQLEKDKDDESLRRWKE
QLLGSVDLNSVGETLEPDVKIMSLSIQSPGRPDIFLPLPAEPSGKGVWFTLKEGSPYKLK
FTFSVSNNIVSGLRYTNTVWKTGIKVDSAKEMLGTFSPQPEPYAYVTPEETTPSGMFARG
SYSAKTKFLDDDRKCYLQINYTFDIRREWPSSG
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctctccgcccccttgctccgttcccaccaccgtcacctccccgtcacctca
tcgccgcgccgctgctcgaccgccgccgccttcccgcgcggcttcgctcccctcgaaccc
ctctcctcccgccggccctcacgcaccgccgcccgctctgcctcaacctcggcagcggca
ccggaggctgcggaggcaacgggacacgcggcccaggccgaaacggccggggaggaggag
gtggaggcgcgggtcgtgctgcccactaacgagtcctccgagaacctgctgcgcatccgc
cacacctgtgcccatgtcatggccatggccgtacagaagctgttccccaactccaaagtg
accataggcccctggatagacaatggcttctactacgacttcgacatggagccgctcacg
gataaggacctcaagaagatcaagaaggagatggaccgaatcattcgacggaacctccca
ttggtgagggaggaggtgtccagggaagaggctcagaagaggatccaagcgcttaacgag
ccatataagctggagattttggagagaattaaggaagaacccatcacaatttatcacatt
ggagaagagtggtgggatctgtgtgctggccctcatgttgagtctactggcaagatacag
agaaaggctgttgagctcgagtctgttgctggtgcttactggagaggtgatgagaataat
caaatgctacaaaggatatatgggactgcatgggagagtgaagatcaattgaaggcttac
atccacttcaaagaggaggccaagcgcagagaccatcggcgactaggtcaggaccttgat
ctgttctctatacaggaagatgctggcgggggtttagtattctggcatccaaaaggtgct
attatcagacacattttagaagattcgtggaaacaaactcacctgcaacgtggttatgat
ctattgtacactccacatgttgcgaaggctgatctctggaagattagtggacatatagat
ttctacaaagagaacatgtacaaccaaatggatgtagaagatgagccgtatcaacttcgg
cccatgaattgcccttaccacatcttggtatacaagagaaagctacaatcatacagggat
ttacccatcagagtggcagagcttggaactgtctacagatatgagctctctggtgctctg
catgggctgttccgcgtaagagggtttacacaggatgatgcccacatattttgtctcgag
gaccagataaaagatgaaattagaggagttcttgatttaactgaagaaatactggggcag
tttggcttccggaattatgaggtaaacctttcaaccaggccagaaaaatctgttggcagt
gacgacatatgggaaaaggcaacaattgctctgaaagacgcgctggatgataaaggttgg
gggtacacgattgatgaagggggaggtgctttctatggtccgaaaattgatttgaaaatt
gaggatgctcttggaagaaaatggcaatgttccactgtgcaggttgacttcaatttgcct
gaacggtttgacatcacttatgttgactcgcatactgagaagaaacgacctatcatgatt
catagagccatccttgggtctttggagcgtttttttggcatcctcattgaaaactatgct
ggtgattttccactttggcttgctccaacccaagcccgtattctacctgtcacaaacaat
gagttgcagtactgtaacgaggtggcttcggagctgaaatcaagaggtatccgcgccgag
gtatgccacggcgagcgtctgccgaagttaatcagaaacgccgaaacacaaaaggtgccg
ctgatggctgtcgttggccccaaggaagtcgaggccaggacgctcaccatcaggcgggga
cccgacgacccgattgattggggcgtcactcgctgcggatgggacggcgtcgtggggatc
tatgattggagcgtgatggacggaccgaattttaccgggcaagtcgacaacacctgggac
aaaaacctgcagattggggcacactgggatagacttgtcatcttcctgggtggaagaaag
acggagagacgtagatcacctccggaggaggccaaggagtgcgcggcggtcgcggagcac
ggcagcggcaacggcaacggcgggggtgacgccgcgccgcattgcggcaagggcgtggag
gaggaggacgaggaggacggcgagaaggtccccgagcacatcgacctcggccccatcctc
agcatcaaggaccagctggagaaggacaaggacgacgagagcctgcggaggtggaaggag
cagctcctcggcagcgtggacttgaactccgtcggagagacgctggagccggacgtgaag
atcatgagcctgtccatccagtccccggggcggccggacatcttcctgccgctgccggcg
gagccgagcggcaagggggtgtggttcaccctcaaggaaggctccccgtacaagctcaag
ttcaccttctccgtcagcaacaacatcgtctccggcctccgctacaccaacaccgtctgg
aagaccggcatcaaagtggacagcgccaaggagatgctgggcacattcagcccgcagccg
gagccgtacgcgtacgtgacgccggaggagaccacgccgtccgggatgtttgcccgggga
tcctactctgccaagaccaagttcctggacgacgaccggaagtgctacctgcagatcaac
tacaccttcgacatacgcagggagtggccgtcgtcaggctga
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