Hordeum vulgare subsp. vulgare (domesticated barley): 123402676
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Entry
123402676 CDS
T11213
Name
(RefSeq) syntaxin-51-like
KO
K08503
syntaxin of plants SYP5
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
123402676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123402676
Membrane trafficking [BR:
hvg04131
]
SNARE
SNAP-25[C] (Qc)
STX8
123402676
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GFIT
Motif
Pfam:
SNARE
STX6_10_61_N
DUF2721
FAM76
Motif
Other DBs
NCBI-GeneID:
123402676
NCBI-ProteinID:
XP_044952552
UniProt:
F2DPT6
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Position
6H:20328416..20331217
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AA seq
232 aa
AA seq
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MASSADPWVREHGEAARLADDVASMVADRAALPQSGPEAMRHTSAIRRKITILGTRLDTL
EGMLARLPPKSITDKELHKRRDMLSNLKSRAKQMAESFNMSTFANREDLLGQSKKAADDM
SRVAGLDNQGIVGLQRQIMKEQDEGLEKLEQTVLSAKHVALAVNEELDLHARLIDDLDDH
VDGTNSRLQRVQKRLAVLNKRAKGGCSCMSLLLSTVGIVMLVVIVWLLIKYL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccgcggatccgtgggtgcgggagcacggcgaggcggcgcgcctggccgac
gacgtcgcctccatggtcgccgaccgggccgcgctcccgcagtccggcccggaggccatg
cgccacacctccgccatccgccgcaagatcaccatcctcgggaccaggctggacaccctc
gaggggatgctcgccaggcttccccccaaatccatcaccgacaaggagctgcataagcgc
cgagacatgctttctaatttgaaatctagagcaaaacagatggcggaaagtttcaacatg
tcaaccttcgccaacagggaggatttgcttggtcagagtaagaaagctgctgatgacatg
agcagagtcgctgggttggataaccaagggattgttggccttcagaggcaaatcatgaaa
gaacaagatgagggccttgagaagctggagcagacagtgctgagcgcaaaacacgtcgcg
ctggcagtcaatgaggagcttgacctacatgcaagactgattgatgacctagacgaccat
gtggatggtacaaactcgcgcctccagcgtgtgcaaaagaggcttgcggtcctgaacaag
cgcgccaagggcggctgctcctgcatgtccctgctgctgtccaccgtcggtatagtgatg
cttgtggttattgtctggctcctcatcaagtatctgtaa
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