KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123402780
Entry
123402780         CDS       T11213                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hvg03400]
    123402780
DNA repair and recombination proteins [BR:hvg03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    123402780
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_4 zf-RING_2 DEAD ResIII RING_XB3-XBAT31 zf-RING_5 Prok-RING_4 zf-RING_4 zf-ANAPC11 zf-RING_11
Other DBs
NCBI-GeneID: 123402780
NCBI-ProteinID: XP_044952676
UniProt: A0A8I6YS17
LinkDB
Position
6H:62691826..62705534
AA seq 1029 aa
MAKKSERAEQVAAVRAVLGEETPEMDIIRALHMAGDDPTKTINILLDLHHSLPPPPSPSP
SPPPQPPPVQPTKPPSKSIPPPKTPAQPKPAAAAAAGKPRPKSNPAPAGGGEHWWLVGSA
EMAGLSTCKGRRIAAGEPVTFSFPSSATAAAASGKGRPGRFALASCTSEIMRFSTPQHGE
VGRIPNEWARCLLPLLKEGKVKVEALCKSAPEVLSIMDTVLLSASIYINSSMFRDQKQSP
PKATRAATEDSTFHPLPALFKVIGITPFMKAAFTPEDLYSRKRPIERKSSNGEPATKLTS
EKMKLSSSGNEDDHAEGTVSDSDLDVIIGISDSSALEERDPPEALQCDLRPYQKQALHWM
LQLEKGSCSQDAATTLHPCWEAYKLDDKREFVLYLNVFSGDATTEFPSTLQLARGGILAD
AMGLGKTIMTISLLLSDSSKGCVTTQHSSQISGEASGLGETPIQSVDSVKSLASPFSFSK
LRKPKAPLIGGGNLVICPMTLLSQWKAEIEAHTKPNSLNIYVHYGQSRPKEASFIGQNDI
VLTTYGVVASEFSTESSTENGGLYSVHWFRIVLDEAHMIKSSKSLISQAAAALTADRRWC
LTGTPIQNNLEDLYSLFRFLKVEPWRNWALWNKLVQKPFEEGDERGLKLVQTILKPVMLR
RTKNSTDKEGRPILTLPPANIEVKYCDLSESEKDFYEALFRRSKVKFDQFVEQGKVLHNY
APILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLRGGNSTVNGDSSSRPSKAYI
EEVVQELQKGEGECPICLEAFEDAVLTPCAHRLCRECILSSWQSPAAGLCPVCRKSTTKQ
DLITAPTNSRFQIDVEKNWVESSKISFLLQELESLRSSGAKSIVFSQWTAFLDLLEIPLS
RHGISFTRLDGTLNLQQREKVIREFSEDKRILVLLMSLKAGGVGINLTAASNAFVMDPWW
NPAVEEQAVMRIHRIGQTKSVSIKRLIVKGTVEERMEAVQARKQRMISGALTDQEFRTAR
LEELKMLFS
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggcgaagaagagcgagagggcggagcaggtggcggcggtgcgcgcggtgctcggcgag
gagacgccggagatggacatcatccgcgcgctccacatggccggcgacgaccccaccaag
accatcaacatcctcctcgacctccaccacagcctgccgccgccgccgtcgccgtccccg
tcgcccccaccccagcctccgcccgtccaacccaccaaaccccccagcaaatcgatcccg
ccgcccaaaacccccgcgcagccgaagcccgcggcggcggcggcggcagggaaacctagg
cccaagtccaaccccgcgcccgccggcggcggcgagcactggtggctggtggggagcgcc
gagatggccggcctgtccacctgcaagggcaggcgcatcgccgccggggaaccggtcacc
ttctcgttccccagctccgcgaccgcagccgccgcatcgggcaagggccgccctggtcgc
tttgccctcgcttcctgcacctcggagattatgcgcttctcaaccccgcaacacggggag
gtcggtcgtatccccaacgagtgggcgcggtgtctgctaccccttctcaaggaggggaag
gtcaaagtcgaggccctgtgcaaatccgctcctgaggttcttagcatcatggacactgtc
ctcttgtctgctagcatatatatcaacagctccatgttccgtgaccaaaagcagtcaccg
cccaaggcaacacgtgctgctacggaggactccacattccatccactccccgcacttttc
aaagtcatcgggattaccccttttatgaaggcagcatttactcccgaggatctctattcc
agaaagcgaccaattgaaagaaagagcagtaacggggagccagccacaaagttgacatct
gagaaaatgaaattatcttctagcggaaatgaagatgaccatgctgagggaactgtttca
gattcagatttggatgttataattggaatctcagacagttctgcattggaggagagggat
ccacctgaggctctgcagtgcgatctgcgcccttatcagaagcaggcccttcattggatg
ctgcagcttgagaaaggcagttgctcccaggatgcagctacaacccttcacccttgttgg
gaggcatataagcttgatgacaagagggaatttgttttgtacttgaatgtattttcaggg
gatgccactactgaatttcctagtacattacagcttgctagaggagggatactggcagat
gcaatgggactaggaaagactatcatgacgataagtcttcttctttctgattctagcaaa
ggatgcgtcacaactcagcatagtagtcagatctctggagaagctagtgggctgggtgaa
actcctattcagtccgttgattccgtgaagagtctagctagccctttttcttttagcaag
ctcaggaaacctaaggccccactgattggaggtggaaatctagttatctgcccgatgaca
ctactgagtcagtggaaggcagagattgaagctcatacaaaaccgaattctttgaatata
tatgttcattatggccaaagcagaccaaaggaagcaagctttattggtcagaatgatatt
gtcctgaccacctatggtgtcgtggcatcagaattttcaactgagagttctacagaaaat
ggtggcctctactctgttcactggtttagaattgtgcttgatgaggcgcacatgataaag
tcatctaaaagtttaatatcccaagctgctgctgctcttactgctgatcggcgttggtgt
cttactggtacaccaattcagaacaacttggaggatctatacagcctttttaggtttctg
aaggttgaaccatggagaaactgggccctgtggaataaacttgtacaaaaaccatttgaa
gaaggtgacgaaagaggcttaaagctagtgcagaccattttaaagccagtaatgttgagg
agaactaaaaatagcacagacaaggagggcagaccaatccttactctacccccggcgaat
attgaagtgaaatattgtgatctatcagagtctgagaaggacttctatgaagctctgttt
cgacgatctaaggtgaaatttgaccagtttgtggagcaaggtaaggtcctgcacaattat
gctccaatcctggagttgcttttgcgccttaggcaatgttgtgatcatccatttcttgtt
atgagccgtggagatacacaggagtttgcagacctcaataagcttgcaaagcgcttcctg
cgtggtggtaatagtactgttaatggggattcttcttcccgtccctctaaggcttacatt
gaagaggttgtccaagaactgcagaaaggtgagggggaatgccctatttgcctggaagcc
tttgaggatgctgtgttaactccctgtgctcaccgtttatgccgagagtgtattttgtct
agttggcagagtccagcagcaggtctttgtcctgtttgtagaaagtcgacgaccaagcaa
gatctgattactgctccaactaacagtcgcttccaaattgatgttgagaagaactgggtt
gaatcttcgaagatatcttttcttctacaggaattagaatctcttcgcagttcaggcgcc
aagagtatcgtgtttagtcagtggactgcatttctagatctcctggaaattccactttcc
agacatggcatctcatttaccagactggacgggaccttaaatcttcagcagagagagaaa
gtaatccgtgaattttctgaggacaaacgaattctggttttacttatgtctctgaaggct
ggtggtgttggaataaacctcactgctgcctctaacgcgtttgtcatggacccttggtgg
aatcctgctgttgaagaacaagctgtcatgcgcatccatcgaattggtcaaacaaagagt
gtttctatcaaaaggttaattgtcaagggtactgtcgaggaacgaatggaggctgtgcag
gcccgtaagcagcgaatgatttctggagcgttgacggaccaagaattccgcacagcacgt
ctagaagaactgaagatgctcttctcttga

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