Hordeum vulgare subsp. vulgare (domesticated barley): 123403049
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Entry
123403049 CDS
T11213
Name
(RefSeq) F-box/LRR-repeat protein 20
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123403049
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123403049
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_4
LRR_6
LRR_RPS2
LRR_At5g56370
LRR_8
F-box_5
LRR_At1g61320_AtMIF1
LRR_14
F-box
Motif
Other DBs
NCBI-GeneID:
123403049
NCBI-ProteinID:
XP_044952956
UniProt:
F2CQH1
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Position
6H:complement(388059144..388063249)
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AA seq
417 aa
AA seq
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MSASPSEGDEAVINGVLTDDELRAVLTRLGPESERDAFGLVCRRWLRIQSSERRRLRARA
GPSMLRRLAARFPGILELDLSQSPSRSFYPGVIDDDLNVIAGGFCNLRVLALQNCKGITD
VGMVKLGEGLPCLQTLDVSHCKKLSDKGLKVVASGCRKLRQLHIAGCRLITDNLLRAMSK
SCLNLEELGAAGLNSITDAGISALADGCHKMKSLDISKCNKVGDPGICKIAEASSSSLVS
LKLLDCSKVGNKSIHSLAKFCCNLETLIIGGCQHISDESIEALALACCSRLRILRMDWCL
KITDASLRSLLCNCKLLAAIDVGCCDQITDAAFQGMEANLFRSELRVLKINNCVGLTVLG
VSRVIESCKALEYLDVRSCPQVTRQSCEEAGLQLPGSCKVNFEGSLSESDSSVDRFF
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatcaccgtcggaaggcgacgaggccgtcatcaacggggtgctgaccgacgat
gagctccgtgcggtcctcacccgcctggggcccgagtcggagcgcgacgcgttcgggctc
gtgtgcaggcgctggctccggatccagagctccgagcgccgccgcttgcgcgcgcgcgcc
ggtccatccatgctgcgccgcctggcagcacgcttcccgggcattctcgagctcgatctt
tcccaatcgccgtcccgctcgttctaccccggtgttatcgacgacgatctgaacgtcatt
gcaggggggttctgcaatctgcgagtcctcgccctgcagaactgcaaaggtatcactgat
gttggaatggtcaaattaggagaagggctgccatgtctgcaaactctagatgtctctcac
tgcaaaaaacttagtgataaaggtttaaaggtggttgcgtcagggtgccggaagttgaga
cagttgcacatcgcaggttgtagattaataactgataatttgttgcgtgctatgtcaaaa
agctgtttaaacttggaagagcttggggctgcaggattgaacagcataacagatgctgga
atctcagctctagccgatggttgtcataaaatgaagtcgctagacataagtaaatgcaat
aaagttggtgatcctggaatttgcaaaattgccgaggcctcgtcgtcatctctggtgtca
ttgaaactgttggattgcagcaaagtgggcaataagtccatccattcactagccaagttc
tgctgcaacctagagactctcatcatcggtggatgtcagcatattagcgatgagtccata
gaagcactagctcttgcctgttgtagcagactcaggatcttaagaatggactggtgcttg
aaaataacggatgcctcattgagaagtctgctgtgtaactgtaaacttcttgctgccatc
gacgtcggatgctgcgaccaaataactgatgcggcatttcagggcatggaagcgaacttg
tttcggtcggaactgagagttctgaagatcaacaattgtgttggcctcacagttctgggg
gtgagcagggtgatagaatcttgcaaggcactcgagtacctcgacgtccggtcatgtcct
caggttacacggcagagctgtgaggaagctgggttgcagctgcctggtagctgcaaggtg
aactttgaaggtagcttgtcggagtctgattcatctgttgataggttcttctag
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