Hordeum vulgare subsp. vulgare (domesticated barley): 123403165
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Entry
123403165 CDS
T11213
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2
KO
K12195
charged multivesicular body protein 6
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03250
Viral life cycle - HIV-1
hvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123403165
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123403165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123403165
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123403165
Membrane trafficking [BR:
hvg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
123403165
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123403165
Exosomal proteins of other body fluids (saliva and urine)
123403165
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Snf7
TINF2_N
DUF5069
Radial_spoke_3
Parathyroid
Motif
Other DBs
NCBI-GeneID:
123403165
NCBI-ProteinID:
XP_044953061
UniProt:
F2D106
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All DBs
Position
6H:complement(333146928..333151028)
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AA seq
229 aa
AA seq
DB search
MGNVFVKKPKITEVDKAILALKTQRRKLAQFQQQLEKVIEAEKEAARQLVQQKKKDRALI
ALKKKKSQEELLKQVDTWQMNVEQQLADIELASKQKAVLESLKTGNAALKSIQSEINIDD
VQKLMDDTAEAKAYQDEINAALGEQLSAEDEEAVMAEFDNLEAELALESLPDAPVTEVQP
EKKPKAAAYTEAPAEDIDDVIELPDVPTKAPERPEATEKTKVLEEPLPA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgtgttcgtgaagaagcctaagatcacggaggttgacaaggccatcctcgcc
ctcaagacacagcgccgcaagctcgcgcagttccagcagcagcttgagaaggtgattgaa
gcagaaaaggaagctgcacgccagttggttcaacagaagaagaaagacagagctttgatt
gcactgaagaagaagaaatcccaggaagagctcctgaaacaagttgatacatggcaaatg
aatgtcgaacagcagctggcagatattgaactagcaagtaagcaaaaggctgtattggaa
agcctaaagactggaaatgctgcccttaagtctatacagagtgagattaacatcgacgat
gtccaaaagttaatggatgacacagctgaggccaaggcttatcaggatgaaataaatgcc
gctctgggcgaacaactatctgctgaggatgaggaggctgtcatggctgaattcgacaac
ttggaagctgagcttgcacttgagtctctgccggatgctcccgttactgaagtacaacct
gaaaagaaacctaaagcagcggcttacactgaagctccagctgaagacattgatgatgtt
attgagcttcctgatgtaccgactaaagcgccagagaggcctgaagctacagaaaaaaca
aaagtcttggaagagccactacctgcatag
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