Hordeum vulgare subsp. vulgare (domesticated barley): 123403885
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Entry
123403885 CDS
T11213
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type 1-like
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00196
Photosynthesis - antenna proteins
hvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
123403885
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
hvg00194
]
123403885
Photosynthesis proteins [BR:
hvg00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
123403885
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Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
123403885
NCBI-ProteinID:
XP_044953733
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Position
6H:37902561..37906212
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AA seq
400 aa
AA seq
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MAAATMSISSTFAGKTVKNVPSLVLFGEARVTMRKTGAKAKQVSSGSPWYGADRVLYLGP
LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
LGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGYFVQAIVTGKGPLD
NLADHIADPVNNNAWAFATNFVPGNYFAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV
VLMGAVEGYRIAGGPLGEIIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMF
GFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagccaccatgtccatctcctcgacctttgccggcaagacggtgaagaacgta
ccatctttggttctctttggcgaagcccgagtcaccatgcgcaagaccggagcaaaggca
aagcaagtttcctccggcagcccatggtacggtgccgaccgtgtgctctacctcggccca
ctctccggtgagcccccgagctacctcaccggtgagttcccaggcgactatgggtgggac
actgccggactttcagctgaccctgagaccttcgccaagaaccgggagctggaggtgatc
cattgtcgatgggccatgctcggagcacttggttgtgtctttcctgagttgctcgctcgc
aacggcgtcaagttcggtgaggctgtttggttcaaggccggttcccagatctttagtgag
ggtggtctcgactaccttggcaacccaagcctcgtccacgcacaaagtatcctagctatt
tgggcatgccaggtggtgctcatgggtgccgtcgaggggtaccgcattgcaggcggccca
ctcggtgagatcgtcgacccactctacccaggtggcagcttcgaccctcttggcctggct
gaagaccctgaggcattcgccgagctcaaggtgaaggagatcaagaatggtcgcctcgcc
atgttctcaatgtttggctactttgtccaagctatcgtcactggaaagggcccactcgac
aacctcgctgaccacatcgccgaccccgtcaacaacaatgcatgggcattcgccaccaac
tttgtccccggcaattactttgccggctcccagatctttagtgagggtggtctcgactac
cttggcaacccaagccttgtccacgcccaaagcatcctagctatttgggcatgtcaggtc
gtgctcatgggcgccgtcgaggggtaccgcattgcaggcggcccactcggtgagatcatc
gacccactctacccaggtggcagcttcgaccctcttggcctggctgaagaccctgaggca
ttcgccgagctcaaggtgaaggagatcaagaatggtcgcctcgccatgttctcaatgttt
ggcttctttgtccaagccatcgtcacgggcaagggcccactcgagaacctcgctgaccac
atcgccgaccccgtcaacaacaatgcatgggccttcgccaccaactttgtccccggcaag
taa
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