Hordeum vulgare subsp. vulgare (domesticated barley): 123404202
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Entry
123404202 CDS
T11213
Name
(RefSeq) probable protein transport Sec1a isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123404202
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123404202
Membrane trafficking [BR:
hvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123404202
SNARE
SNARE associated proteins
Syntaxin-binding proteins
123404202
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123404202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
MMPL
Motif
Other DBs
NCBI-GeneID:
123404202
NCBI-ProteinID:
XP_044954054
LinkDB
All DBs
Position
6H:236571501..236675817
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AA seq
721 aa
AA seq
DB search
MSLDSDSSSQGGHRRSFRQITRDRLLFEMLRSTRKGSKSAWKVLIMDKFTVKIMSYSCKM
ADITEEGVSLVEDLYKRRQPLPSLDAIYFIQPTKENVVMFLSDMSGRSPLYKKAYVFFSS
PIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKY
NACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYK
TSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNGSAS
GNKEVLLEDHDPVWLELRHSHIADASERLHDKMTHFVSKNKAAQLHQVRTGGELSTRDLQ
KMVQALPQYTDQIDKLSLHVEIAGKLNAIIREQCLRDVGQLEQDLVFGDAGTKELINFFQ
TQLGVSRENKLRLLMIYAAINPEKFENDKGTKMMQLAGLSADDMIAVNNMRCLCADTKKS
SGGGFTLKFDVQKKKHAHRKERTMEQSAWALSRFYPVLELWPPTSADLFTSCPTRGSLYC
CNYLSCLASCCPTCSLLLPACIAACCPASRFPQQLLTLELIEQLSKGELPKDEYNCMNDP
SPSFHVVPTTTSTSARTSPAHSMRSRKTGGSWARPRGSDDGYSSDSVLKHASSDFQKHGQ
RIFVFVIGGATRSELRAAHKLTSKLKREVILGSSSLDDPPQFITKLKMMSAEELTLDDLH
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttagattcggactcctcttcgcagggcggccaccgccggagcttccggcagatc
acacgagaccgattattatttgaaatgctcaggtcgactaggaagggttcaaaatcagca
tggaaggttcttatcatggataagtttacagtcaagataatgtcctactcctgtaagatg
gcggatatcacagaagaaggggtttcattggttgaagatctatacaaacggaggcagcca
ttaccttcactggatgctatatatttcatccaaccaactaaagaaaacgttgttatgttc
ctctctgacatgtcaggaagaagcccgttatacaagaaggcatatgtgtttttcagttct
cccatacagaaagacttagttgctcaaataaaaagggattcaagtatattacctcgtatt
ggtgcactcagtgagatgaatttggagtacttccctattgattcccagggtttcataact
gaccatgaaagggcattggaagagcttttctgtgagagtgcagaaggcttcaacaaatac
aatgcttgtttgaatgcaatggctactcgtatatctacagtatttgcatcaatgagggaa
tttccccgtgtgcactaccgcattgccaagaccattgatgcttctacaatgacaacacta
agggacatggtacccacaaagattgctgctggtgtatggaattatctctccaaatataaa
acgtcaattcctgaattcccgcagacagaaacttgtgaacttctcatagtagaccgttca
gtagatcagattgcaccaataattcatgaatggacttatgatgccatgtgccatgatctg
ctatgcatggatggtaacaagtacgtacatgaggtttcaagtaaaaatggttcagcctca
ggaaacaaggaggtcctgttagaggaccatgatccagtttggcttgaacttcgacattcc
catatagcagatgcaagtgaaagacttcatgataagatgacacattttgtctcgaagaac
aaagccgcccaactacaccaagtgagaactggaggagagctatcaactagagacctacaa
aaaatggttcaagctcttccacagtacacagatcaaattgacaagctttcgctgcatgtc
gagattgcaggaaagctcaatgccataataagggagcaatgtcttcgagatgttggacaa
ctagagcaagatcttgtatttggtgatgctgggacaaaagaattgatcaatttttttcag
acacaattgggtgtaagtcgtgaaaataagttgcgtctgctcatgatttacgcagcaatc
aatccagagaagtttgaaaacgataagggtacaaaaatgatgcagctggcaggattatct
gctgatgacatgattgctgtgaataatatgcgctgcttatgcgctgacacaaaaaagtcc
tcaggaggaggttttacactgaaatttgatgttcagaagaaaaaacatgcacatagaaaa
gagcgaacaatggaacaatcagcatgggcgctgtcccgattttatccggttctggagctc
tggccgcccacatctgcagacctgttcacctcttgccccacgcgcggctctctgtactgc
tgcaactatctttcttgcctggcttcctgttgccccacgtgttctctcctccttccagct
tgcattgctgcctgctgccctgcatctcgctttcctcaacagctgctcacattggaattg
attgagcagctcagcaagggtgaattaccaaaagatgaatataactgcatgaacgaccct
agtcccagtttccatgtagtacctaccactaccagtacttcagcccgcacgagcccagct
cactcgatgagatctaggaagactggtggatcatgggctaggcctcgtggttctgatgat
ggttattcaagtgattctgtattgaagcatgcatcgagtgatttccaaaagcatggccag
cgtatatttgtttttgtcattggtggtgctactcgatcagagttacgcgctgcgcacaag
cttacatcgaagctgaagcgtgaggtcatccttggttcgtccagccttgatgatcccccc
cagttcatcacaaaactgaagatgatgtcagccgaagagctgacactggacgatcttcac
atataa
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