Hordeum vulgare subsp. vulgare (domesticated barley): 123404399
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Entry
123404399 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123404399
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123404399
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
123404399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
RING_XB3-XBAT31
TPR_MLP1_2
TolA_bind_tri
Prok-RING_4
zf-ANAPC11
TRS130_4HB
zf-Nse
zf-C3HC4_5
zf-RING_4
zf-RING_6
DUF4410
Motif
Other DBs
NCBI-GeneID:
123404399
NCBI-ProteinID:
XP_044954254
UniProt:
A0A8I6YC04
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Position
6H:412012185..412023809
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AA seq
873 aa
AA seq
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MGSTGEPDRKRRLSGSFAQGVDAAPPAKRPALPPSSDDKKLDFAVIKYRNQKLSEQLEVH
KSEYHALEGKFDDLKQKQKSHHETQDLVNKSWQHLVRDLKDMSVCKSGSQNSSCSAVPSN
VSTDGACIRKDEDFLSRLGETGATESSGCHLEKHACSSTTDVLQNILFSSNDSRQKLPLD
HFAALPEDERIRELQSTASEISLELNDAIQALGDLHLKHRQLTEKHHEERYLNARRKAEQ
KRLKEELTSAVAELEESNHKLAVLKAQGDTTHGTPILFPTLGNKSLHQDNVRDKQKELQD
LGASHKEFTGLISQRLVEIRRLHEERIAILNKLATFQNTLTDLKSISSSKAFQVLKDQLQ
KSQAELDHCRALLEKLQVNKDKLIWQEREINVKVDLSGILYRVSLNCESNLEVLDQNLGK
VVDEKNMLAMKLEESSREPDRNQIISEFKALVSSLPGEMGAMQTELSKYKDDASELHSLR
AEVRSISDILARNEHAINKSLCKSSRAGSEVRDLRSRVCELRQTNCELKLFVEMYKREST
DSRDVLESKYGEYCEWAHVHSLKFSLDDNRLEQRVKAAIEAEATSQQKLASGEAEIAELR
GKMESARRDIGNLSELLKSKHEEGEAYLSEIESIGQAYEDIQTQNQQLLQQIIERDDHNT
KIFMEGVKVKQAQDTLHLEVCNLNRNLRQAKNLMDLYKDKIAQLDDKLKVWSEQTARLSE
DERRHSVSSGNAQRKLADVQGEVQQLRESMDQVQSKVGRSRLEVAGLLVELEKDRFSKRR
IEDDLESLSRKASSLRAKTQASSVLEKIHQEVSEYRGILKCGVCRDRQKEVVITKCYHLF
CNDCIQKLLRNRQRRCPSCALSFGANDVKPIYI
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaccggcgagcccgatcggaagcggcggctctctggctctttcgcgcagggt
gttgacgcggcacctcccgccaagcgcccagcgcttccgccttcctccgacgacaagaag
cttgattttgctgtaattaaatacagaaaccaaaagctttcagaacagctagaagtccat
aagtctgagtaccatgcccttgagggtaaatttgatgatctcaaacagaaacagaagtct
caccatgagacccaagatctagttaacaagtcatggcagcatcttgtgagagatttgaag
gatatgtctgtttgcaaaagtgggtcccaaaattcttcctgcagtgcagttcctagcaac
gtgtctacggatggtgcatgcatccggaaagatgaggacttccttagcaggctcggtgag
acaggtgccacagaaagctctggttgccatttggaaaagcacgcatgctcgtcaactact
gatgtgctgcagaatatcttgttctcctcaaatgattcacggcagaagttaccattagac
cactttgctgcattacctgaagatgagcgcatcagggaactgcaaagtactgctagtgag
atatcgctggagcttaatgatgccatacaagcacttggtgatctccacttgaagcacaga
cagctgacagagaagcaccatgaagagagatatttaaacgctcgaagaaaagctgaacag
aaacgccttaaagaggagttgacaagtgctgttgctgagttggaagaaagcaaccacaaa
ttggcagtcctcaaagcacagggagacacgacgcatggaactccaatcttatttccaact
ttaggaaataaaagcttgcatcaggataatgtcagagacaaacaaaaggaattgcaggat
ctaggggcttctcacaaggagtttacgggtctgatttcacaacgcttggttgaaataagg
agacttcatgaagagagaattgcaattttgaacaagttggctacttttcagaacactttg
acggatttgaagagcatttcttcttcaaaagctttccaagttctgaaggatcaactccaa
aagtcacaagcagagttggaccactgccgggcactattagagaaattacaggttaataag
gataaattgatatggcaagaaagggaaattaatgtaaaagttgacctgtctggaattctt
tatagggtatctctcaattgtgagtcaaaccttgaagttttggatcagaatttggggaaa
gtagttgacgaaaagaatatgcttgcaatgaaactcgaagaatcttcgagagaacctgat
cggaatcaaatcatatcagaattcaaagcgctggtgtcatcactgccaggagaaatgggc
gctatgcaaactgaactatccaagtacaaggatgatgcctcagaattacattctttacga
gccgaagttcgctccatttctgatattctggctagaaatgagcatgccatcaacaagtca
ttatgtaaatcctctcgtgctggatctgaagtaagggatctacgatccagggtttgcgag
ctaaggcaaacaaattgcgagttaaagctctttgtggaaatgtataagcgcgaatctact
gattcaagagatgtgctggagtcgaaatatggagaatattgtgaatgggctcatgtccat
agcctcaaattttctcttgatgataatagactagaacagcgtgttaaggcagccatcgaa
gctgaagcaacgtctcagcagaaactagcaagtggtgaagctgagattgctgaattaagg
gggaagatggagagtgccagaagagatattggtaatttatctgaattattgaaatcaaag
catgaagaaggtgaagcgtacctgtcagagattgagagtattgggcaagcatatgaagat
atacaaacacaaaatcaacaattgctacagcaaattattgagagagatgaccacaataca
aagatctttatggaaggcgttaaggtgaaacaggcacaggatactttgcatttagaggta
tgcaacctgaacaggaatttacggcaggcaaagaatttgatggatctgtacaaagataag
atcgcccagttagacgacaagttaaaagtttggtcagagcagacagcgagactttcagag
gatgaacggcgacattctgtttcttcaggcaatgctcaaagaaagctggcggatgtacag
ggagaggttcaacagttgagagagtcaatggaccaagtacaatccaaggttgggaggagt
cgactagaagttgctgggctgcttgtagaactagagaaggataggtttagtaagaggaga
atcgaggatgatttggaatcattgtcaaggaaagctagttctcttagagcaaagacacaa
gcatcgtcggtgttggaaaagattcatcaggaggtcagtgagtacaggggaatattgaaa
tgtggtgtttgccgtgaccgacagaaagaggtcgtgattaccaagtgctaccatcttttc
tgcaacgactgtatacagaagttgctcagaaaccgccaacgaaggtgcccttcctgtgca
ttaagctttggggctaatgatgtgaagccgatttatatatga
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