Hordeum vulgare subsp. vulgare (domesticated barley): 123404672
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Entry
123404672 CDS
T11213
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hvg03036
]
123404672
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hvg04812
]
123404672
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
123404672
Cytoskeleton proteins [BR:
hvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
123404672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
HEAT_EZ
Cnd1
TOR1L1_N
Adaptin_N
HEAT_DAAF5
INTS1_R4
MMS19_C
Tti2
Motif
Other DBs
NCBI-GeneID:
123404672
NCBI-ProteinID:
XP_044954546
UniProt:
A0A8I6YWZ0
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All DBs
Position
6H:552138195..552148259
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AA seq
1212 aa
AA seq
DB search
MASSTAAARLRELAPVPGAGVSAAAAAALAECCAGLLGCGDAGAACSALDALCAAGGDAM
RRHADELTPLVVGRLGDGDAAVREAARRFLVLLMEMKEMNARSENTQAGSSVPDVHYSSF
MTSEAESSSANQVRKNPKQKSNTRDMSLLAGEEDITRKSIEPIKVFSEKDLIKEIGKITS
TLQPENDWSIRITSMQRVEGIVLGGAADYSAFPTLLKQLMPPLIAQLLDRRSSVVKQACH
LLVFLSKELLRDFELCAELLIPALLKNVVITVLVIAESADNCIKEMLRNCKVARILPRII
ECAKNDRSAILRGRCCEYAILMLEYWVDTPELQRSANLYEELIKCCIADATSEVRSGARA
CYRIFSRIWPERSHQLFSSFEPSRQKMIIDDDAETHQKQLSPIEGVKLGQPQSVPCIPTA
MDKVVMVDSQTSISSGDLQSALVKIPRHSDMTLKIPAKDSKDDLATGRTFEDMSTLGKER
IPVRDPDERVSGISSPSRDLPSATPFEPTQDILLSDAIVIATFQDKAECKPEVEHITSCQ
VQASGDPSEMLSRTPPASSEESENLLNQRPTKSSSNGISGGRLRTQQEERPCVRTPRKSV
VPKHSSNNHTPNFRRPLLSKLMTNWFYASTRGDLDGKQLIIGEMANSMDVPSSLPGALSL
GLNPKSDWMMRVYAFNFLRQHLLERGPKGIQEVAQNFEKVMRLVSQYLGDPHHKVAHGAL
SSLAEIMPVFKKPFEHYLDKMLPHVFSRLNDPKESTKQQCFAILKLAGESYSIDSLLPAL
LRSLDEQKSPKSKLAILEFAKASFAKCTVSSDIYSGSSFLKPWLGKLTLLFKDRNKKLKE
AAVVGLSSVYCHYDPETMLSFIVTLSMEEQKQLTRAIKQLIPMIGSDLEEFLQQRRHKQK
VPSFERFAATDPHPRSYVGRQHKSQQHDAYQSSDVRVNEVFSSAFQYLPSTHLEVYGRRT
AKVESELGGESYGHRPETMGKIFSPARRSKDMMMNGSQSHEPSVSKMHHQDMRSVAETNS
HSAPIKNLHQMSSSLLEMLDDPTESTRELALSLLAGTLEKQEKALENCIETLVVKLLHAT
KDSALKVVNLAHICLTTVVTQFDPLRCLLAIVSQLVSHDEKILIVSINSLSKLVMRLSHD
DLMDNLSTFLPVVLDAFENHSPYVRKAILLCLVDTYLKLGPAVAPYLERLGGSQLLQLVV
ATSASRLSRAKV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccaccgcggcggcgaggctgcgggagctggcgcctgttccgggagcgggt
gtctcagccgctgcagcggcagccctcgccgagtgttgcgcgggcctcctcggctgcgga
gacgccggggcagcgtgctcggcgcttgacgcgctgtgcgccgcaggaggtgacgcgatg
cggcgccatgccgacgagctcacgccgctggtcgtcgggcggctcggcgacggcgacgct
gccgtgcgggaggcggccaggaggttcctcgtgctgctcatggagatgaaggagatgaat
gcaaggtcggaaaatacacaagcaggttctagtgtaccagatgtccactacagtagtttt
atgacaagcgaagctgaatcttccagtgctaatcaagtaaggaaaaatcccaaacaaaag
agcaacacaagagatatgtcacttctagcaggggaagaagatattacaagaaaatcaatt
gagcctataaaagtattctctgagaaagatttgataaaggaaataggaaaaataacgtct
actttacagccagagaatgactggtcaattcggataacttcaatgcaaagagtggaaggc
atagttcttggaggtgccgcagattattcagccttccccacgcttctaaagcaactcatg
ccccctcttatagctcaacttctggacaggagatctagcgttgtaaaacaggcatgccat
ttgttagtctttctatcaaaggagctactgcgtgacttcgaactatgtgctgagttgctt
attccggcccttctaaagaatgtcgtgatcaccgttcttgtaattgccgagtctgctgat
aactgtataaaagagatgctacgaaactgcaaagtagctcgcatcctaccaagaattatt
gaatgcgcaaaaaatgacagaagcgcaattctccgtggcaggtgttgtgagtatgcaata
ctgatgctagagtattgggttgacactcccgaactacagagatcggctaatctgtatgaa
gaactcataaagtgttgcatagcagatgcaaccagtgaggttcggtccggtgctagggca
tgctacaggatattctccagaatttggcctgaacgttctcatcagctcttctcgtcattt
gaaccatccaggcagaaaatgataatcgatgatgatgctgagacccatcaaaagcagtta
tctccaatagaaggagttaagctcgggcaacctcagtctgttccttgcattccaactgca
atggacaaggttgtcatggtcgattctcagacatcaatttcttctggggacctgcagtca
gcactggtgaaaatacctcgtcattctgatatgacccttaaaattccggccaaagatagt
aaagatgatttagctactggaagaacattcgaggatatgagcacattaggaaaagaaaga
attcctgttcgagaccctgatgaacgtgtttcaggtatcagttctccatcccgtgatttg
ccctctgccaccccatttgaaccaactcaagacattctattgtcagacgcaattgtcata
gcaactttccaggacaaggccgagtgcaagccggaggttgaacatataacttcttgtcaa
gttcaagcatcaggggatccttctgagatgttgagccgcactcctcctgctagttcagaa
gagtcggaaaacttgctaaaccaaaggcccactaaatcaagctctaatggaatatcaggt
ggaagattaaggacccaacaagaagagaggccctgtgttagaactcctcgaaagagtgta
gttccgaagcactcatcgaataaccacactcctaacttccggcgacctctcctgagtaag
ctgatgacaaactggttctatgccagtacaagaggtgatttagatggtaaacaactcatt
attggtgaaatggccaatagcatggatgtgccctcatctctcccaggggcactttcttta
ggcctcaacccaaagtcagattggatgatgagggtatatgcattcaacttcttacggcag
cacttgctcgagcgaggaccaaaaggcattcaggaagttgcacagaattttgagaaggtt
atgaggcttgttagtcagtatttgggtgatccgcatcataaagtggcgcatggtgctctt
tcatcacttgctgagatcatgccggttttcaagaagccctttgaacattatctggacaag
atgctgccccatgttttctctcgattaaatgatccaaaggagtcaaccaagcagcaatgc
ttcgcaattttgaaacttgcaggtgaaagttactccattgattctctcttacctgctctg
cttcgttcactagacgagcaaaaatccccaaagtcaaagcttgcaattcttgagtttgca
aaggcctcttttgcaaaatgcacagttagctctgacatctattctggtagcagttttctt
aagccatggcttggaaagctaactcttctgtttaaggatagaaacaagaagctaaaagag
gctgcagtggttggtttatcttcagtctattgtcattatgatccagaaaccatgttaagc
tttatagttaccttgtcgatggaagaacagaagcaacttacgcgggcaataaagcagtta
atccctatgatagggagcgacctagaagagttcttgcagcaaaggagacataaacagaaa
gtgccatcttttgagcgctttgctgctacagatcctcatcccagaagttatgttggaagg
caacataaatcccagcagcatgacgcatatcaatctagtgatgttagagtcaatgaagta
tttagctccgcatttcagtatctcccaagcactcacttggaagtatatgggcgtcgtact
gcgaaggttgaatctgaattgggtggtgaatcttatggtcacagacctgaaacgatgggt
aaaatttttagtcctgcaaggcgaagcaaggatatgatgatgaatggtagtcagagtcac
gagccaagcgtttccaagatgcatcatcaggacatgaggagtgttgctgagacgaacagt
cattcagcgccaatcaagaatttacatcagatgtcctcctctctccttgagatgcttgat
gacccaactgaatccaccagagagcttgccctttctctattggctggaactcttgaaaaa
caagaaaaggcattggagaactgtatcgagactcttgtagttaaattgttgcatgcaacc
aaagattctgccttgaaggtagtaaatctggcgcatatttgtctgacaacagtggttact
caatttgatccgctgagatgccttctggcaattgtttctcagttggtctcccatgatgag
aaaatccttattgtcagcatcaacagtttgagcaagcttgtgatgcggctgtcacacgac
gacttgatggacaatttgtcgacatttctacccgtggtcttggacgccttcgaaaaccac
agcccatatgttcgcaaggctattttgctgtgtctggtggacacgtacctgaagctgggg
ccggcggtggccccgtacctggagcggctaggcggctcgcagctgctgcagctcgtcgta
gccacgtcggcgagcagactgtccagggcgaaagtctga
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