Hordeum vulgare subsp. vulgare (domesticated barley): 123404722
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Entry
123404722 CDS
T11213
Name
(RefSeq) homeobox-leucine zipper protein ROC8-like
KO
K09338
homeobox-leucine zipper protein
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123404722
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
123404722
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
123404722
NCBI-ProteinID:
XP_044954607
UniProt:
A0A8I6YVP1
F2EKH7
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Position
6H:complement(520493836..520498062)
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AA seq
685 aa
AA seq
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MDFGDDLAPGSDAHRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMHLSRELGLEPRQI
KFWFQNRRTQMKAQHERADNCFLRAENDKIRCENIAMREALKNVICPTCGGPHSGADDYF
DEHKLRMENAHLKEELDRVSSLTSKYLGRPITQLPSMQPLSMSSLELSVGGLGSPVALGP
ALDLDTLGGSSPFQLPAPVSDMERPMMAEMATRAMDELIRLAQAGEHLWVKTAGGREVLN
VDTYDSIFAKPGSSSFRGPDVHVEGSRDSCLVLTTAIGLVDTFMDSSKWTEFFPTVVTRA
RTIDVLVNGMAGRSESLVLMYEELHVMSPVVPTREFCFLRYCRQIEQGLWAIADVSVDLQ
RDARYGAPPARSRRLPSGCLIADMSNGYSKVTWVEHMETEDKTPINQLYRDLVLSGAAFG
AHRWLAALQRACERHACLVTPPHRDIAGVTLEGKRSMMRLSQRMVGSFCASLSASQQHRW
TTLSGPGAGVDEAAGVRVMVHRSTDPGQPSGVVLSAATSIWLPVPCDRVFAFVRDENTRS
QWDVLSHGNPVQEVSRIPNGSHPGNSISLLRGLNASQNSMLILQESCADASGSLVVYAPI
DLPAANVVMSGEDPSAIPLLPSGFTILPDGRASSSGSVVTVAFQILVSSLPSSRLNAESV
ATVNSLIGTTVEQIKAALNCGGSSH
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggacttcggcgacgacctcgcgccgggctccgacgcccaccgccgcaagaagcggtac
caccgccacaccccgcgccagattcagcagctcgaggcgatgttcaaggagtgcccgcac
ccggacgagaaccagcggatgcacctcagccgggagctggggctggagccgaggcagatc
aagttctggttccagaaccgccggactcagatgaaggcgcagcacgagcgcgccgacaac
tgcttcctccgcgcggagaacgacaagatccgctgcgagaacatcgccatgcgcgaggcg
ctcaagaacgtcatctgccccacctgcggcggcccgcactccggcgccgacgactacttc
gacgagcacaagctccgcatggagaacgcccacctcaaagaagagcttgaccgggtgtcc
agcctgacgtccaagtacctggggcggcccatcacgcagctcccgtcgatgcagccgctc
tccatgtcgtcgctggagctctccgtcggcgggctcggcagcccggtggctctcggcccc
gcgctcgaccttgacacgctcggcgggagctccccgttccagctcccggcgcccgtgtcg
gacatggagcggccgatgatggcggagatggcgacgcgggccatggacgagctcatcagg
ctggcgcaggccggcgagcacctctgggtcaagacagcgggcggacgagaggtgctcaac
gtcgacacgtacgacagcatcttcgccaagcccgggagcagctcattccgcggcccggac
gtgcacgtcgagggctcccgcgactcttgcctcgtgctcaccaccgccatcggcctcgtc
gacacgttcatggactcgagcaagtggacggagttcttcccgaccgtcgtgaccagggcg
cgcacgatcgacgttctcgtgaacggcatggccggccggagcgagtctttggtgcttatg
tacgaggagctgcacgtgatgtcgccggtcgtcccgacgcgcgagttttgtttcctccgc
tactgccggcagatagagcagggactgtgggcgatcgccgacgtctcggtggacttgcag
cgggacgcccgctacggcgcgccgccggcacgatcgcgccggctcccctcgggctgcctc
atcgccgatatgtccaatggctattccaaggtgacctgggtggaacacatggagacggag
gacaagacccccatcaaccagctctaccgcgacctcgtcctgagcggcgcggcgttcggc
gcgcaccggtggctggcggcgctgcagagggcgtgcgagcggcatgcgtgcctcgtgacg
ccgccgcacagggacatcgccggggtgacgttggagggaaagaggagcatgatgaggctg
tcgcaacggatggtgggcagcttctgcgccagcctgagcgcgtcgcagcagcaccggtgg
acgacgctgtcggggcccggcgcgggcgtggacgaggcggcgggcgtgcgcgtcatggtg
caccgcagcacggaccccgggcagccgagcggcgtggtgctcagcgccgccacctccatc
tggctccccgtgccctgcgaccgggtgttcgccttcgtccgcgacgagaacacgcgctcc
cagtgggacgtgctctcgcacggcaacccggtgcaggaggtgtcgcgcatcccgaatggc
tcgcacccggggaactccatctccttgctcagaggcctgaacgcgagccagaacagcatg
ctgatcctgcaggagagctgcgcggacgcgtcggggtcgctggtggtgtacgcgccgatc
gacctcccggcggcgaacgtggtgatgagcggcgaggacccatcggcgatcccgctgctg
ccgtcgggtttcaccatcctgcccgacggccgcgcgtccagctcggggtcggtggtgacg
gtggcgttccagatcctggtgagcagcctgccgtcgtcgcggctgaacgcggagtcggtg
gccacggtcaacagcctcatcggcaccactgtggagcaaatcaaggcggccctcaactgc
ggcggcagcagccattga
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